General features
| Gene ID | MPN471
|
| Type | CDS
|
| From | 574251
|
| To | 574090
|
| Strand | -
|
| General name | rpmG
|
| Definition | ribosomal protein L33
|
| nt length | 162
|
| aa length | 53
|
| m.w. | 6281.50
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE3900 rpmG ribosomal protein L33 511349:511537 | 77 | 1.2e-22
|
| mgen | WP_009885961.1 50S ribosomal protein L33 [Mycoplasma genitalium] | 101 | 6.2e-33
|
| mpul | WP_010925290.1 50S ribosomal protein L33 [Mycoplasma pulmonis] | 38 | 9.2e-08
|
| mmob | WP_011265069.1 50S ribosomal protein L33 [Mycoplasma mobile] | 40 | 2.5e-08
|
| mgal | WP_011113695.1 50S ribosomal protein L33 [Mycoplasma gallisepticum] | 88 | 1.1e-27
|
| uure | WP_004025771.1 50S ribosomal protein L33 [Ureaplasma urealyticum] | 72 | 3.1e-21
|
| phyt | WP_011160619.1 MULTISPECIES: 50S ribosomal protein L33 [Candidatus Phytoplasma] | 37 | 1.3e-07
|
| bsub | NP_570908.2 ribosomal protein L33 [Bacillus subtilis subsp. subtilis str. 168] | 42 | 1.7e-08
|
| cace | WP_010966428.1 50S ribosomal protein L33 [Clostridium acetobutylicum] | 46 | 2.7e-10
|
| ecoli | NP_418093.1 50S ribosomal subunit protein L33 [Escherichia coli str. K-12 substr. MG1655] | 31 | 4.1e-04
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L33 | 1 | Ribosomal protein L33 | 8-51 | 59.2 | 3.9e-16
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874827.1| 50S ribosomal protein L33 [Mycoplasma pneumoniae] | 53/53 (100%) | 265 | 2.6e-29
|
| ref|WP_009885961.1| 50S ribosomal protein L33 [Mycoplasma genitalium] | 50/53 (94%) | 252 | 2.1e-27
|
| ref|WP_011113695.1| 50S ribosomal protein L33 [Mycoplasma gallisepticum] | 42/53 (79%) | 219 | 2.4e-22
|
| ref|WP_027122071.1| 50S ribosomal protein L33 [Mycoplasma imitans] | 41/53 (77%) | 209 | 8.2e-21
|
| ref|WP_027119465.1| 50S ribosomal protein L33 [Mycoplasma testudinis] | 39/53 (73%) | 209 | 9.9e-21
|
| ref|WP_004025069.1| 50S ribosomal protein L33 [Mycoplasma iowae] | 37/53 (69%) | 199 | 2.9e-19
|
| ref|WP_033160281.1| 50S ribosomal protein L33 [Mycoplasma alvi] | 38/53 (71%) | 198 | 4.9e-19
|
| ref|WP_027123944.1| 50S ribosomal protein L33 [Mycoplasma pirum] | 36/53 (67%) | 193 | 2.5e-18
|
| ref|WP_011077215.1| 50S ribosomal protein L33 [Mycoplasma penetrans] | 35/53 (66%) | 188 | 1.7e-17
|
| ref|WP_144240908.1| 50S ribosomal protein L33 [Mycoplasma iowae] | 34/51 (66%) | 181 | 1.4e-16
|
Maintained by Jun Ishikawa