General features
| Gene ID | MYPE4580
|
| Type | CDS
|
| From | 596908
|
| To | 595901
|
| Strand | -
|
| General name | trpS
|
| Definition | tryptophanyl-tRNA synthetase
|
| nt length | 1008
|
| aa length | 335
|
| m.w. | 38059.70
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN265 trpS tryptophanyl-tRNA synthetase 318087:317047 | 277 | 1.4e-93
|
| mgen | WP_009885680.1 tryptophan--tRNA ligase [Mycoplasma genitalium] | 240 | 3.7e-79
|
| mpul | WP_010925546.1 tryptophan--tRNA ligase [Mycoplasma pulmonis] | 303 | 8.6e-104
|
| mmob | WP_011265021.1 tryptophan--tRNA ligase [Mycoplasma mobile] | 329 | 4.5e-114
|
| mmyc | NP_975353.1 tryptophanyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 333 | 1.2e-115
|
| mgal | WP_080512219.1 tryptophan--tRNA ligase [Mycoplasma gallisepticum] | 275 | 2.8e-92
|
| uure | WP_004025822.1 tryptophan--tRNA ligase [Ureaplasma urealyticum] | 347 | 4.3e-121
|
| phyt | WP_041624959.1 tryptophan--tRNA ligase [Onion yellows phytoplasma] | 277 | 6.5e-94
|
| bsub | NP_389024.1 tryptophanyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] | 314 | 1.4e-107
|
| cace | WP_014518857.1 MULTISPECIES: tryptophan--tRNA ligase [Clostridium] | 281 | 1.6e-94
|
| ecoli | NP_417843.1 tryptophan--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 286 | 2.9e-96
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA-synt_1b | 1 | tRNA synthetases class I (W and Y) | 3-286 | 252.2 | 6.4e-75
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077282.1| tryptophan--tRNA ligase [Mycoplasma penetrans] | 335/335 (100%) | 1768 | 0.0e+00
|
| ref|WP_004025487.1| tryptophan--tRNA ligase [Mycoplasma iowae] | 215/332 (64%) | 1133 | 1.2e-152
|
| ref|WP_047791730.1| tryptophan--tRNA ligase [Spiroplasma eriocheiris] | 184/328 (56%) | 950 | 8.8e-125
|
| ref|WP_025251329.1| tryptophan--tRNA ligase [Spiroplasma sabaudiense] | 189/329 (57%) | 938 | 5.2e-123
|
| ref|WP_025317670.1| MULTISPECIES: tryptophan--tRNA ligase [Spiroplasma] | 181/328 (55%) | 937 | 9.9e-123
|
| ref|WP_118764649.1| tryptophan--tRNA ligase [Solobacterium moorei] | 181/330 (54%) | 934 | 2.2e-122
|
| ref|WP_100254956.1| tryptophan--tRNA ligase [Spiroplasma clarkii] | 182/329 (55%) | 934 | 2.9e-122
|
| ref|WP_006526456.1| tryptophan--tRNA ligase [Solobacterium moorei] | 181/330 (54%) | 931 | 4.5e-122
|
| ref|WP_028077312.1| tryptophan--tRNA ligase [Solobacterium moorei] | 180/330 (54%) | 931 | 4.6e-122
|
| ref|WP_134297242.1| tryptophan--tRNA ligase [Spiroplasma gladiatoris] | 185/329 (56%) | 929 | 1.7e-121
|
Maintained by Jun Ishikawa