General features
| Gene ID | MYPE4420
|
| Type | CDS
|
| From | 579621
|
| To | 579923
|
| Strand | +
|
| General name | rpL21
|
| Definition | ribosomal protein L21
|
| nt length | 303
|
| aa length | 100
|
| m.w. | 11519.65
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN325 rplU ribosomal protein L21 385837:386139 | 98 | 3.5e-30
|
| mgen | WP_009885769.1 50S ribosomal protein L21 [Mycoplasma genitalium] | 97 | 6.5e-30
|
| mpul | WP_010925134.1 50S ribosomal protein L21 [Mycoplasma pulmonis] | 81 | 1.9e-23
|
| mmob | WP_011264824.1 50S ribosomal protein L21 [Mycoplasma mobile] | 100 | 6.8e-31
|
| mmyc | NP_975546.1 50S ribosomal protein L21 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 83 | 3.1e-24
|
| mgal | WP_011113613.1 50S ribosomal protein L21 [Mycoplasma gallisepticum] | 114 | 2.2e-36
|
| uure | WP_004025926.1 50S ribosomal protein L21 [Ureaplasma urealyticum] | 127 | 2.5e-41
|
| phyt | WP_041624647.1 MULTISPECIES: 50S ribosomal protein L21 [Candidatus Phytoplasma asteris] | 71 | 1.3e-19
|
| bsub | NP_390674.1 ribosomal protein L21 (BL20) [Bacillus subtilis subsp. subtilis str. 168] | 92 | 4.8e-27
|
| cace | WP_010964569.1 50S ribosomal protein L21 [Clostridium acetobutylicum] | 82 | 5.1e-23
|
| ecoli | NP_417653.1 50S ribosomal subunit protein L21 [Escherichia coli str. K-12 substr. MG1655] | 75 | 2.8e-20
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L21p | 1 | Ribosomal prokaryotic L21 protein | 1-97 | 115.2 | 1.4e-33
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077266.1| 50S ribosomal protein L21 [Mycoplasma penetrans] | 100/100 (100%) | 506 | 9.9e-65
|
| ref|WP_004024963.1| 50S ribosomal protein L21 [Mycoplasma iowae] | 78/100 (78%) | 403 | 5.8e-49
|
| ref|WP_036451744.1| 50S ribosomal protein L21 [Mycoplasma iowae] | 77/100 (77%) | 395 | 1.0e-47
|
| ref|WP_004025926.1| 50S ribosomal protein L21 [Ureaplasma urealyticum] | 63/100 (63%) | 318 | 5.8e-36
|
| ref|WP_006688851.1| 50S ribosomal protein L21 [Ureaplasma parvum] | 63/100 (63%) | 316 | 9.7e-36
|
| ref|WP_031488935.1| 50S ribosomal protein L21 [Ureaplasma canigenitalium] | 64/97 (65%) | 309 | 1.4e-34
|
| ref|WP_038102801.1| 50S ribosomal protein L21 [Ureaplasma diversum] | 59/100 (59%) | 301 | 2.1e-33
|
| ref|WP_011884417.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum] | 58/98 (59%) | 287 | 2.5e-31
|
| ref|WP_014886016.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum] | 58/98 (59%) | 288 | 3.3e-31
|
| ref|WP_156920490.1| 50S ribosomal protein L21 [Mycoplasma imitans] | 58/98 (59%) | 287 | 4.3e-31
|
Maintained by Jun Ishikawa