General features

Gene IDMYPE4310
TypeCDS
From564326
To566824
Strand+
General name
Definitionputative integral membrane protein, immuno-dominant variable surface antigen of Entamoeba histolytica CAA38847.1, Expect=3.0e-16, Identities=29%
nt length2499
aa length832
m.w.93827.18
COG[J] Translation, ribosomal structure and biogenesis

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mmycNP_975840.1 hypothetical protein MSC_0870 [Mycoplasma mycoides subsp. mycoides SC str. PG1]282.0e-01
bsubNP_389770.1 conserved hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]281.5e+00

*mmyc, Mycoplasma mycoides; bsub, Bacillus subtilis;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Peptidase_M601Peptidase M60, enhancin and enhancin-like21-22862.15.7e-17

CE2_N1Carbohydrate esterase 2 N-terminal622-71133.14.3e-08

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077255.1| integral membrane protein, partial [Mycoplasma penetrans]832/832 (100%)43580.0e+00
ref|WP_129374392.1| hypothetical protein [Mycoplasma penetrans]829/832 (99%)43530.0e+00
ref|WP_044891249.1| hypothetical protein [Mycoplasma penetrans]826/826 (100%)43250.0e+00
ref|WP_011077148.1| hypothetical protein [Mycoplasma penetrans]138/527 (26%)2801.6e-21
ref|WP_129374538.1| hypothetical protein [Mycoplasma penetrans]138/527 (26%)2791.8e-21
ref|XP_001737701.1| antigenic protein NP1 [Entamoeba dispar SAW760]67/221 (30%)1961.8e-11
ref|XP_654508.1| immuno-dominant variable surface antigen [Entamoeba histolytica HM-1:IMSS...65/218 (29%)1942.7e-11
ref|XP_008860134.1| immuno-dominant variable surface antigen, putative [Entamoeba nuttalli...65/218 (29%)1915.8e-11
ref|XP_001313628.1| Immuno-dominant variable surface antigen-like [Trichomonas vaginalis G...35/88 (39%)1917.2e-11
ref|XP_001299523.1| Immuno-dominant variable surface antigen-like [Trichomonas vaginalis G...43/98 (43%)1862.3e-10

Maintained by Jun Ishikawa