General features
| Gene ID | MPN424
|
| Type | CDS
|
| From | 510561
|
| To | 510253
|
| Strand | -
|
| General name | ylxM
|
| Definition | conserved hypothetical protein
|
| nt length | 309
|
| aa length | 102
|
| m.w. | 12477.55
|
| COG | [S] Function unknown
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE4850 conserved hypothetical protein 622513:622836 | 52 | 1.1e-11
|
| mpul | WP_041364208.1 hypothetical protein [Mycoplasma pulmonis] | 43 | 7.9e-09
|
| mmob | WP_011264620.1 alanine dehydrogenase [Mycoplasma mobile] | 25 | 1.4e-01
|
| mmyc | NP_975476.1 DNA-binding protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 63 | 5.3e-16
|
| mgal | WP_011113404.1 hypothetical protein [Mycoplasma gallisepticum] | 50 | 3.8e-11
|
| uure | WP_004025510.1 putative DNA-binding protein [Ureaplasma urealyticum] | 50 | 5.6e-11
|
| bsub | NP_389479.1 component of the signal recognition particle (SRP) protein-targeting pathway [Bacillus subtilis subsp. subtilis str. 168] | 53 | 1.6e-11
|
| cace | WP_010965060.1 MULTISPECIES: putative DNA-binding protein [Clostridium] | 46 | 6.5e-09
|
| ecoli | YP_026208.1 AsmA2 domain-containing protein [Escherichia coli str. K-12 substr. MG1655] | 28 | 7.4e-02
|
*mype, Mycoplasma penetrans; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| UPF0122 | 1 | Putative helix-turn-helix protein, YlxM / p13 like | 6-97 | 121.2 | 1.8e-35
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874780.1| hypothetical protein [Mycoplasma pneumoniae] | 102/102 (100%) | 515 | 5.0e-66
|
| ref|WP_080511180.1| putative DNA-binding protein [Mycoplasma mycoides] | 44/95 (46%) | 164 | 2.1e-12
|
| ref|WP_012242301.1| hypothetical protein [Acholeplasma laidlawii] | 31/75 (41%) | 163 | 2.2e-12
|
| ref|WP_129924072.1| putative DNA-binding protein [Mycoplasma mycoides] | 44/95 (46%) | 163 | 2.7e-12
|
| ref|WP_013729594.1| putative DNA-binding protein [Mycoplasma mycoides] | 43/95 (45%) | 159 | 1.2e-11
|
| ref|WP_129923730.1| putative DNA-binding protein [Mycoplasma mycoides] | 43/95 (45%) | 157 | 2.0e-11
|
| ref|WP_152644641.1| putative DNA-binding protein [Mycoplasma capricolum] | 42/95 (44%) | 156 | 2.9e-11
|
| ref|WP_011387353.1| putative DNA-binding protein [Mycoplasma capricolum] | 42/95 (44%) | 156 | 3.3e-11
|
| ref|WP_142796141.1| putative DNA-binding protein [Mycoplasma capricolum] | 42/95 (44%) | 156 | 3.7e-11
|
| ref|WP_036428185.1| putative DNA-binding protein [Mycoplasma capricolum] | 42/95 (44%) | 155 | 3.8e-11
|
Maintained by Jun Ishikawa