General features
| Gene ID | MPN422
|
| Type | CDS
|
| From | 509863
|
| To | 508751
|
| Strand | -
|
| General name |
|
| Definition | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
|
| nt length | 1113
|
| aa length | 370
|
| m.w. | 41772.50
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE8250 trmD tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase 1105471:1104359 | 322 | 5.8e-110
|
| mgen | WP_162465265.1 tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma genitalium] | 489 | 5.2e-176
|
| mpul | WP_010925359.1 tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma pulmonis] | 266 | 4.5e-88
|
| mmob | WP_156768871.1 tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma mobile] | 251 | 2.8e-82
|
| mmyc | NP_975433.1 tRNA-specific 2-thiouridylase MnmA [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 276 | 2.9e-92
|
| mgal | WP_011113349.1 tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma gallisepticum] | 286 | 6.7e-93
|
| uure | WP_004026155.1 tRNA 2-thiouridine(34) synthase MnmA [Ureaplasma urealyticum] | 282 | 1.4e-94
|
| phyt | WP_011160500.1 tRNA 2-thiouridine(34) synthase MnmA [Onion yellows phytoplasma] | 256 | 1.6e-84
|
| bsub | NP_390627.3 tRNA-specific 2-thiouridylase [Bacillus subtilis subsp. subtilis str. 168] | 233 | 8.1e-75
|
| cace | WP_010965531.1 MULTISPECIES: tRNA 2-thiouridine(34) synthase MnmA [Clostridium] | 164 | 1.4e-48
|
| ecoli | NP_415651.4 tRNA-specific 2-thiouridylase [Escherichia coli str. K-12 substr. MG1655] | 218 | 3.8e-69
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA_Me_trans | 1 | tRNA methyl transferase | 5-365 | 442.7 | 7.8e-133
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874778.1| tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma pneumoniae] | 370/370 (100%) | 1990 | 0.0e+00
|
| ref|WP_053344190.1| tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma pneumoniae] | 369/370 (99%) | 1988 | 0.0e+00
|
| ref|WP_159202905.1| tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma pneumoniae] | 369/370 (99%) | 1984 | 0.0e+00
|
| ref|WP_162465265.1| tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma genitalium] | 230/365 (63%) | 1258 | 1.8e-170
|
| ref|WP_033160287.1| tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma alvi] | 178/365 (48%) | 877 | 1.8e-112
|
| ref|WP_027123973.1| tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma pirum] | 180/369 (48%) | 863 | 2.2e-110
|
| ref|WP_036498895.1| tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma testudinis] | 184/364 (50%) | 853 | 8.1e-109
|
| ref|WP_011077646.1| tRNA 2-thiouridine(34) synthase MnmA [Mycoplasma penetrans] | 173/362 (47%) | 825 | 8.8e-105
|
| ref|WP_100609350.1| tRNA 2-thiouridine(34) synthase MnmA [Entomoplasma freundtii] | 171/366 (46%) | 782 | 5.1e-98
|
| ref|WP_134297348.1| tRNA 2-thiouridine(34) synthase MnmA [Spiroplasma gladiatoris] | 167/365 (45%) | 760 | 6.1e-95
|
Maintained by Jun Ishikawa