General features

Gene IDMYPE410
TypeCDS
From48615
To49175
Strand+
General name
Definitionpredicted GTP-binding protein
nt length561
aa length186
m.w.21070.21
COG[R] General function prediction only

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN481 yihA GTP-binding, era-like 586484:5859031291.3e-39
mgenWP_010869438.1 YihA family ribosome biogenesis GTP-binding protein [Mycoplasma genitalium]1243.7e-38
mpulWP_010925043.1 YihA family ribosome biogenesis GTP-binding protein [Mycoplasma pulmonis]1117.2e-33
mmobWP_011264860.1 YihA family ribosome biogenesis GTP-binding protein [Mycoplasma mobile]1122.4e-33
mmycNP_975289.1 ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. mycoides SC str. PG1]1248.6e-38
mgalWP_011113826.1 YihA family ribosome biogenesis GTP-binding protein [Mycoplasma gallisepticum]1865.6e-62
uureWP_004025617.1 YihA family ribosome biogenesis GTP-binding protein [Ureaplasma urealyticum]2052.0e-69
phytWP_011160392.1 MULTISPECIES: YihA family ribosome biogenesis GTP-binding protein [Candidatus Phytoplasma asteris]921.1e-25
bsubNP_390697.1 GTPase involved in ribosome 50S subunit assembly (maturation of the central 50S protuberance) [Bacillus subtilis subsp. subtilis str. 168]1056.8e-30
caceWP_010965924.1 MULTISPECIES: YihA family ribosome biogenesis GTP-binding protein [Clostridium]936.0e-25
ecoliNP_418301.3 GTP-binding protein YihA [Escherichia coli str. K-12 substr. MG1655]1001.2e-27

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

MMR_HSR1150S ribosome-binding GTPase21-13669.52.4e-19

FeoB_N1Ferrous iron transport protein B21-18050.02.3e-13

SRPRB1Signal recognition particle receptor beta subunit19-7521.30.00014

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011076867.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma penetr...186/186 (100%)9603.9e-131
ref|WP_036452521.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma iowae]103/185 (55%)5231.6e-64
ref|WP_004025617.1| YihA family ribosome biogenesis GTP-binding protein [Ureaplasma urealy...103/186 (55%)5224.8e-64
ref|WP_004024643.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma iowae]102/185 (55%)5195.2e-64
ref|WP_141926362.1| YihA family ribosome biogenesis GTP-binding protein [Ureaplasma urealy...103/186 (55%)5215.4e-64
ref|WP_006689168.1| YihA family ribosome biogenesis GTP-binding protein [Ureaplasma parvum...105/186 (56%)5209.3e-64
ref|WP_006688825.1| YihA family ribosome biogenesis GTP-binding protein [Ureaplasma parvum...105/186 (56%)5191.0e-63
ref|WP_011884843.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma gallis...99/185 (53%)4743.7e-57
ref|WP_011113826.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma gallis...95/177 (53%)4711.2e-56
ref|WP_027121815.1| YihA family ribosome biogenesis GTP-binding protein [Mycoplasma imitan...94/177 (53%)4711.3e-56

Maintained by Jun Ishikawa