General features
| Gene ID | MYPE40
|
| Type | CDS
|
| From | 4970
|
| To | 7483
|
| Strand | +
|
| General name | gyrA
|
| Definition | DNA gyrase subunit A
|
| nt length | 2514
|
| aa length | 837
|
| m.w. | 93431.72
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN004 gyrA DNA gyrase subunit A 4821:7340 | 955 | 0.0e+00
|
| mgen | WP_009885559.1 DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma genitalium] | 956 | 0.0e+00
|
| mpul | WP_010924951.1 DNA gyrase subunit A [Mycoplasma pulmonis] | 846 | 0.0e+00
|
| mmob | WP_011265014.1 DNA gyrase subunit A [Mycoplasma mobile] | 852 | 0.0e+00
|
| mmyc | NP_975018.1 DNA gyrase subunit A [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 669 | 0.0e+00
|
| mgal | WP_011113986.1 DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma gallisepticum] | 1030 | 0.0e+00
|
| uure | WP_004027138.1 DNA topoisomerase (ATP-hydrolyzing) subunit A [Ureaplasma urealyticum] | 1038 | 0.0e+00
|
| phyt | WP_101674500.1 DNA gyrase subunit A [Onion yellows phytoplasma] | 700 | 0.0e+00
|
| bsub | NP_387888.1 DNA gyrase (subunit A) [Bacillus subtilis subsp. subtilis str. 168] | 872 | 0.0e+00
|
| cace | WP_010963336.1 MULTISPECIES: DNA gyrase subunit A [Clostridium] | 786 | 0.0e+00
|
| ecoli | NP_416734.1 DNA gyrase subunit A [Escherichia coli str. K-12 substr. MG1655] | 722 | 0.0e+00
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| DNA_topoisoIV | 1 | DNA gyrase/topoisomerase IV, subunit A | 43-482 | 527.6 | 2.3e-158
|
| DNA_gyraseA_C | 6 | DNA gyrase C-terminal domain, beta-propeller | 521-559, 566-614, 622-664, 668-703, 730-773, 781-826 | 186.0 | 5e-56
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011076830.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma penetrans] | 837/837 (100%) | 4343 | 0.0e+00
|
| ref|WP_129374491.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma penetrans] | 834/837 (99%) | 4326 | 0.0e+00
|
| ref|WP_004024801.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma iowae] | 694/828 (83%) | 3586 | 0.0e+00
|
| ref|WP_129692494.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma iowae] | 693/828 (83%) | 3583 | 0.0e+00
|
| ref|WP_036451329.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma iowae] | 694/828 (83%) | 3582 | 0.0e+00
|
| ref|WP_027123736.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma pirum] | 511/828 (61%) | 2727 | 0.0e+00
|
| ref|WP_027122269.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma imitans] | 499/828 (60%) | 2694 | 0.0e+00
|
| ref|WP_084266115.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Mycoplasma testudinis] | 501/828 (60%) | 2687 | 0.0e+00
|
| ref|WP_004025553.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Ureaplasma urealyticum] | 506/835 (60%) | 2686 | 0.0e+00
|
| ref|WP_144446851.1| DNA topoisomerase (ATP-hydrolyzing) subunit A [Ureaplasma parvum] | 501/833 (60%) | 2685 | 0.0e+00
|
Maintained by Jun Ishikawa