General features

Gene IDMYPE3960
TypeCDS
From516292
To518019
Strand+
General name
DefinitionAAA domain-containing protein
nt length1728
aa length575
m.w.66851.20
COG[R] General function prediction only

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
bsubNP_390586.2 transcriptional regulator (NifA/NtrC family) [Bacillus subtilis subsp. subtilis str. 168]366.5e-03
caceWP_010963781.1 MULTISPECIES: sigma-54-dependent transcriptional regulator [Clostridium]396.1e-04
ecoliNP_418202.4 regulatory ATPase RavA [Escherichia coli str. K-12 substr. MG1655]2255.8e-68

*bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

AAA_51AAA domain (dynein-related subfamily)61-18989.22.3e-25

AAA_lid_81AAA lid domain248-33081.53e-23

Sigma54_activat1Sigma-54 interaction domain48-17925.21.1e-05

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_129374378.1| AAA domain-containing protein [Mycoplasma penetrans]573/573 (100%)29950.0e+00
ref|WP_129692645.1| AAA domain-containing protein [Mycoplasma iowae]432/574 (75%)23170.0e+00
ref|WP_036452409.1| AAA domain-containing protein [Mycoplasma iowae]431/572 (75%)23110.0e+00
ref|WP_109615618.1| AAA domain-containing protein [Sediminitomix flava]152/315 (48%)7621.1e-90
ref|WP_126618101.1| AAA domain-containing protein [Flammeovirga pectinis]150/310 (48%)7253.8e-85
ref|WP_144073359.1| AAA domain-containing protein [Flammeovirga kamogawensis]151/310 (48%)7236.3e-85
ref|WP_051788652.1| AAA domain-containing protein [Nonlabens ulvanivorans]164/435 (37%)7201.4e-84
ref|WP_044208075.1| AAA domain-containing protein [Flammeovirga sp. OC4]151/335 (45%)7183.9e-84
ref|WP_062619998.1| AAA domain-containing protein [Flammeovirga sp. SJP92]151/335 (45%)7151.0e-83
ref|WP_084005945.1| AAA domain-containing protein [Flammeovirga sp. MY04]184/491 (37%)7123.1e-83

Maintained by Jun Ishikawa