General features
| Gene ID | MYPE3900
|
| Type | CDS
|
| From | 511349
|
| To | 511537
|
| Strand | +
|
| General name | rpmG
|
| Definition | ribosomal protein L33
|
| nt length | 189
|
| aa length | 62
|
| m.w. | 7335.63
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN471 rpmG ribosomal protein L33 574251:574090 | 77 | 8.2e-23
|
| mgen | WP_009885961.1 50S ribosomal protein L33 [Mycoplasma genitalium] | 76 | 7.8e-23
|
| mpul | WP_010925290.1 50S ribosomal protein L33 [Mycoplasma pulmonis] | 42 | 3.5e-09
|
| mmob | WP_011265069.1 50S ribosomal protein L33 [Mycoplasma mobile] | 45 | 3.0e-10
|
| mgal | WP_011113695.1 50S ribosomal protein L33 [Mycoplasma gallisepticum] | 72 | 9.4e-21
|
| uure | WP_004025771.1 50S ribosomal protein L33 [Ureaplasma urealyticum] | 67 | 4.5e-19
|
| phyt | WP_011160619.1 MULTISPECIES: 50S ribosomal protein L33 [Candidatus Phytoplasma] | 42 | 3.4e-09
|
| bsub | NP_570908.2 ribosomal protein L33 [Bacillus subtilis subsp. subtilis str. 168] | 44 | 2.8e-09
|
| cace | WP_010966428.1 50S ribosomal protein L33 [Clostridium acetobutylicum] | 45 | 1.0e-09
|
| ecoli | NP_418093.1 50S ribosomal subunit protein L33 [Escherichia coli str. K-12 substr. MG1655] | 28 | 1.1e-02
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L33 | 1 | Ribosomal protein L33 | 15-60 | 59.8 | 2.5e-16
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077215.1| 50S ribosomal protein L33 [Mycoplasma penetrans] | 53/53 (100%) | 264 | 6.3e-29
|
| ref|WP_004025069.1| 50S ribosomal protein L33 [Mycoplasma iowae] | 44/53 (83%) | 232 | 4.8e-24
|
| ref|WP_144240908.1| 50S ribosomal protein L33 [Mycoplasma iowae] | 40/51 (78%) | 214 | 2.5e-21
|
| ref|WP_010874827.1| 50S ribosomal protein L33 [Mycoplasma pneumoniae] | 35/53 (66%) | 188 | 2.1e-17
|
| ref|WP_009885961.1| 50S ribosomal protein L33 [Mycoplasma genitalium] | 36/53 (67%) | 187 | 2.6e-17
|
| ref|WP_033160281.1| 50S ribosomal protein L33 [Mycoplasma alvi] | 36/53 (67%) | 182 | 1.6e-16
|
| ref|WP_027123944.1| 50S ribosomal protein L33 [Mycoplasma pirum] | 34/53 (64%) | 182 | 2.0e-16
|
| ref|WP_027119465.1| 50S ribosomal protein L33 [Mycoplasma testudinis] | 33/53 (62%) | 180 | 3.9e-16
|
| ref|WP_011113695.1| 50S ribosomal protein L33 [Mycoplasma gallisepticum] | 34/53 (64%) | 175 | 2.0e-15
|
| ref|WP_027122071.1| 50S ribosomal protein L33 [Mycoplasma imitans] | 34/53 (64%) | 170 | 1.0e-14
|
Maintained by Jun Ishikawa