General features
| Gene ID | MYPE390
|
| Type | CDS
|
| From | 47785
|
| To | 48378
|
| Strand | +
|
| General name |
|
| Definition | conserved hypothetical protein
|
| nt length | 594
|
| aa length | 197
|
| m.w. | 22440.47
|
| COG | [K] Transcription
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN301 ypuH conserved hypothetical protein 355039:355665 | 126 | 2.9e-38
|
| mgen | WP_009885754.1 segregation/condensation protein B [Mycoplasma genitalium] | 122 | 1.2e-36
|
| mpul | WP_041363922.1 segregation/condensation protein B [Mycoplasma pulmonis] | 82 | 3.7e-21
|
| mmob | WP_011264996.1 segregation/condensation protein B [Mycoplasma mobile] | 90 | 1.4e-24
|
| mmyc | NP_975377.1 hypothetical protein MSC_0386 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 80 | 2.7e-20
|
| mgal | WP_011113648.1 SMC-Scp complex subunit ScpB [Mycoplasma gallisepticum] | 149 | 3.0e-46
|
| uure | WP_012560306.1 segregation/condensation protein B [Ureaplasma urealyticum] | 131 | 2.2e-38
|
| bsub | NP_390202.1 chromosome condensation and segregation factor [Bacillus subtilis subsp. subtilis str. 168] | 104 | 4.0e-29
|
| cace | WP_010965360.1 MULTISPECIES: segregation/condensation protein B [Clostridium] | 92 | 1.1e-24
|
| ecoli | NP_418719.1 KpLE2 phage-like element; putative DNA-binding transcriptional regulator YjhI [Escherichia coli str. K-12 substr. MG1655] | 26 | 8.5e-01
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| SMC_ScpB | 1 | Segregation and condensation complex subunit ScpB | 8-168 | 159.3 | 5.5e-47
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011076865.1| segregation/condensation protein B [Mycoplasma penetrans] | 197/197 (100%) | 1029 | 2.6e-141
|
| ref|WP_129692507.1| SMC-Scp complex subunit ScpB [Mycoplasma iowae] | 132/191 (69%) | 711 | 7.1e-93
|
| ref|WP_081794307.1| SMC-Scp complex subunit ScpB [Mycoplasma pirum] | 77/190 (40%) | 387 | 3.4e-43
|
| ref|WP_084269011.1| SMC-Scp complex subunit ScpB [Mycoplasma alvi] | 79/189 (41%) | 385 | 1.2e-42
|
| ref|WP_065165738.1| SMC-Scp complex subunit ScpB [Mycoplasma gallisepticum] | 76/191 (39%) | 386 | 2.7e-42
|
| ref|WP_014574590.1| SMC-Scp complex subunit ScpB [Mycoplasma gallisepticum] | 76/191 (39%) | 383 | 5.8e-42
|
| ref|WP_014886049.1| SMC-Scp complex subunit ScpB [Mycoplasma gallisepticum] | 75/191 (39%) | 382 | 9.9e-42
|
| ref|WP_151059694.1| SMC-Scp complex subunit ScpB [Mycoplasma gallisepticum] | 75/191 (39%) | 381 | 1.2e-41
|
| ref|WP_151029818.1| SMC-Scp complex subunit ScpB [Mycoplasma gallisepticum] | 75/191 (39%) | 381 | 1.2e-41
|
| ref|WP_011113648.1| SMC-Scp complex subunit ScpB [Mycoplasma gallisepticum] | 74/191 (38%) | 376 | 6.4e-41
|
Maintained by Jun Ishikawa