General features
| Gene ID | MPN390
|
| Type | CDS
|
| From | 467846
|
| To | 466473
|
| Strand | -
|
| General name | pdhD
|
| Definition | dihydrolipoamide dehydrogenase
|
| nt length | 1374
|
| aa length | 457
|
| m.w. | 49436.95
|
| COG | [C] Energy production and conversion
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE5110 pdhD dihydrolipoamide dehydrogenase of pyruvate dehydrogenase E3 component 650595:651986 | 426 | 3.4e-148
|
| mgen | WP_009885903.1 dihydrolipoyl dehydrogenase [Mycoplasma genitalium] | 674 | 0.0e+00
|
| mpul | WP_010925561.1 dihydrolipoyl dehydrogenase [Mycoplasma pulmonis] | 354 | 4.5e-118
|
| mmob | WP_011265100.1 dihydrolipoyl dehydrogenase [Mycoplasma mobile] | 386 | 9.4e-131
|
| mmyc | NP_975267.1 dihydrolipoamide dehydrogenase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 344 | 2.4e-114
|
| mgal | WP_011113731.1 dihydrolipoyl dehydrogenase [Mycoplasma gallisepticum] | 479 | 3.9e-169
|
| phyt | WP_011160952.1 MULTISPECIES: dihydrolipoyl dehydrogenase [Candidatus Phytoplasma asteris] | 331 | 2.1e-111
|
| bsub | NP_389344.1 dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes [Bacillus subtilis subsp. subtilis str. 168] | 313 | 2.0e-103
|
| ecoli | NP_414658.1 lipoamide dehydrogenase [Escherichia coli str. K-12 substr. MG1655] | 261 | 5.4e-83
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; phyt, ; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Pyr_redox_2 | 1 | Pyridine nucleotide-disulphide oxidoreductase | 3-318 | 237.2 | 2.2e-70
|
| Pyr_redox_dim | 1 | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | 340-445 | 113.9 | 4e-33
|
| Pyr_redox | 1 | Pyridine nucleotide-disulphide oxidoreductase | 173-242 | 68.8 | 4.4e-19
|
| Pyr_redox_3 | 1 | Pyridine nucleotide-disulphide oxidoreductase | 119-302 | 65.4 | 5e-18
|
| GIDA | 1 | Glucose inhibited division protein A | 4-139 | 35.9 | 4.6e-09
|
| K_oxygenase | 1 | L-lysine 6-monooxygenase (NADPH-requiring) | 122-269 | 28.4 | 8.5e-07
|
| FAD_binding_2 | 1 | FAD binding domain | 4-36 | 22.1 | 6.8e-05
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874746.1| dihydrolipoyl dehydrogenase [Mycoplasma pneumoniae] | 457/457 (100%) | 2417 | 0.0e+00
|
| ref|WP_054173234.1| dihydrolipoyl dehydrogenase [Mycoplasma pneumoniae] | 456/457 (99%) | 2412 | 0.0e+00
|
| ref|WP_159201751.1| dihydrolipoyl dehydrogenase [Mycoplasma pneumoniae] | 456/457 (99%) | 2412 | 0.0e+00
|
| ref|WP_014325505.1| dihydrolipoyl dehydrogenase [Mycoplasma pneumoniae] | 456/457 (99%) | 2410 | 0.0e+00
|
| ref|WP_014574964.1| dihydrolipoyl dehydrogenase [Mycoplasma pneumoniae] | 455/457 (99%) | 2409 | 0.0e+00
|
| ref|WP_053344013.1| dihydrolipoyl dehydrogenase [Mycoplasma pneumoniae] | 454/457 (99%) | 2405 | 0.0e+00
|
| ref|WP_159204725.1| dihydrolipoyl dehydrogenase [Mycoplasma pneumoniae] | 455/457 (99%) | 2405 | 0.0e+00
|
| ref|WP_086135757.1| dihydrolipoyl dehydrogenase [Mycoplasma pneumoniae] | 453/457 (99%) | 2402 | 0.0e+00
|
| ref|WP_053344141.1| dihydrolipoyl dehydrogenase [Mycoplasma pneumoniae] | 455/457 (99%) | 2397 | 0.0e+00
|
| ref|WP_009885903.1| dihydrolipoyl dehydrogenase [Mycoplasma genitalium] | 332/456 (72%) | 1740 | 0.0e+00
|
Maintained by Jun Ishikawa