General features
| Gene ID | MPN380
|
| Type | CDS
|
| From | 457147
|
| To | 457980
|
| Strand | +
|
| General name | fpg
|
| Definition | formamidopyrimidine-DNA glycosylase
|
| nt length | 834
|
| aa length | 277
|
| m.w. | 31854.65
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE2000 fpg formamidopyrimidine-DNA glycosylase 253088:253921 | 268 | 1.1e-91
|
| mgen | WP_010869400.1 DNA-formamidopyrimidine glycosylase [Mycoplasma genitalium] | 375 | 5.2e-134
|
| mpul | WP_010925114.1 DNA-formamidopyrimidine glycosylase [Mycoplasma pulmonis] | 201 | 1.3e-65
|
| mmob | WP_011264892.1 DNA-formamidopyrimidine glycosylase [Mycoplasma mobile] | 218 | 2.9e-72
|
| mmyc | NP_975659.1 formamidopyrimidine-DNA glycosylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 191 | 1.7e-61
|
| mgal | WP_011113476.1 DNA-formamidopyrimidine glycosylase [Mycoplasma gallisepticum] | 271 | 5.5e-93
|
| uure | WP_004025792.1 DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum] | 280 | 1.5e-96
|
| phyt | WP_011161018.1 DNA-formamidopyrimidine glycosylase [Onion yellows phytoplasma] | 185 | 1.8e-59
|
| bsub | NP_390786.2 formamidopyrimidine-DNA glycosylase; 5-hydroxymethyl-uracil DNA-glycosylase [Bacillus subtilis subsp. subtilis str. 168] | 184 | 3.1e-58
|
| cace | WP_076611753.1 MULTISPECIES: IS1595-like element ISCac2 family transposase [Clostridium] | 28 | 4.0e-01
|
| ecoli | NP_418092.1 DNA-formamidopyrimidine glycosylase [Escherichia coli str. K-12 substr. MG1655] | 142 | 5.9e-42
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| H2TH | 1 | Formamidopyrimidine-DNA glycosylase H2TH domain | 135-226 | 116.1 | 5.2e-34
|
| Fapy_DNA_glyco | 1 | Formamidopyrimidine-DNA glycosylase N-terminal domain | 1-117 | 93.2 | 1.5e-26
|
| zf-FPG_IleRS | 1 | Zinc finger found in FPG and IleRS | 249-274 | 25.0 | 1.3e-05
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874736.1| DNA-formamidopyrimidine glycosylase [Mycoplasma pneumoniae] | 277/277 (100%) | 1462 | 0.0e+00
|
| ref|WP_010869400.1| DNA-formamidopyrimidine glycosylase [Mycoplasma genitalium] | 182/274 (66%) | 963 | 1.7e-128
|
| ref|WP_014894643.1| DNA-formamidopyrimidine glycosylase [Mycoplasma genitalium] | 181/274 (66%) | 958 | 1.0e-127
|
| ref|WP_004026582.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum] | 142/277 (51%) | 717 | 2.9e-91
|
| ref|WP_004025792.1| DNA-formamidopyrimidine glycosylase [Ureaplasma urealyticum] | 142/277 (51%) | 717 | 3.6e-91
|
| ref|WP_027123862.1| DNA-formamidopyrimidine glycosylase [Mycoplasma pirum] | 137/275 (49%) | 715 | 6.0e-91
|
| ref|WP_033159716.1| DNA-formamidopyrimidine glycosylase [Mycoplasma alvi] | 146/275 (53%) | 712 | 1.9e-90
|
| ref|WP_006689001.1| DNA-formamidopyrimidine glycosylase [Ureaplasma parvum] | 140/274 (51%) | 711 | 2.2e-90
|
| ref|WP_006688737.1| DNA-formamidopyrimidine glycosylase [Ureaplasma parvum] | 140/274 (51%) | 711 | 2.2e-90
|
| ref|WP_088409184.1| DNA-formamidopyrimidine glycosylase [Ureaplasma parvum] | 140/274 (51%) | 711 | 2.5e-90
|
Maintained by Jun Ishikawa