General features
| Gene ID | MPN360
|
| Type | CDS
|
| From | 430334
|
| To | 430627
|
| Strand | +
|
| General name | rpmE
|
| Definition | ribosomal protein L31
|
| nt length | 294
|
| aa length | 97
|
| m.w. | 10958.53
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE640 rpmE ribosomal protein L31 74150:74443 | 80 | 6.6e-23
|
| mgen | WP_010869398.1 50S ribosomal protein L31 [Mycoplasma genitalium] | 151 | 2.9e-51
|
| mpul | WP_010924944.1 50S ribosomal protein L31 [Mycoplasma pulmonis] | 56 | 9.8e-14
|
| mmob | WP_011264648.1 50S ribosomal protein L31 [Mycoplasma mobile] | 45 | 1.6e-09
|
| mmyc | NP_975149.1 50S ribosomal protein L31 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 49 | 8.7e-11
|
| mgal | WP_011113366.1 50S ribosomal protein L31 [Mycoplasma gallisepticum] | 96 | 2.6e-29
|
| uure | WP_004025943.1 50S ribosomal protein L31 [Ureaplasma urealyticum] | 70 | 3.7e-19
|
| phyt | WP_011160480.1 MULTISPECIES: 50S ribosomal protein L31 [Candidatus Phytoplasma asteris] | 41 | 6.3e-08
|
| bsub | NP_391588.1 ribosomal protein L31 [Bacillus subtilis subsp. subtilis str. 168] | 43 | 2.6e-08
|
| cace | WP_010966172.1 MULTISPECIES: 50S ribosomal protein L31 [Clostridium] | 54 | 2.3e-12
|
| ecoli | NP_418371.1 50S ribosomal subunit protein L31 [Escherichia coli str. K-12 substr. MG1655] | 52 | 1.4e-11
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L31 | 1 | Ribosomal protein L31 | 1-67 | 65.7 | 3.3e-18
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874716.1| 50S ribosomal protein L31 [Mycoplasma pneumoniae] | 97/97 (100%) | 505 | 1.2e-64
|
| ref|WP_054174969.1| 50S ribosomal protein L31 [Mycoplasma pneumoniae] | 95/97 (97%) | 490 | 2.2e-62
|
| ref|WP_054175476.1| 50S ribosomal protein L31 [Mycoplasma pneumoniae] | 94/97 (96%) | 476 | 3.6e-60
|
| ref|WP_054175807.1| 50S ribosomal protein L31 [Mycoplasma pneumoniae] | 82/93 (88%) | 391 | 3.3e-47
|
| ref|WP_010869398.1| 50S ribosomal protein L31 [Mycoplasma genitalium] | 71/97 (73%) | 381 | 9.9e-46
|
| ref|WP_014894636.1| 50S ribosomal protein L31 [Mycoplasma genitalium] | 70/97 (72%) | 374 | 1.1e-44
|
| ref|WP_014894238.1| 50S ribosomal protein L31 [Mycoplasma genitalium] | 61/84 (72%) | 321 | 3.2e-36
|
| ref|WP_011113366.1| 50S ribosomal protein L31 [Mycoplasma gallisepticum] | 50/97 (51%) | 239 | 5.6e-24
|
| ref|WP_011883863.1| 50S ribosomal protein L31 [Mycoplasma gallisepticum] | 50/97 (51%) | 237 | 9.7e-24
|
| ref|WP_033159923.1| 50S ribosomal protein L31 [Mycoplasma alvi] | 50/97 (51%) | 230 | 1.1e-22
|
Maintained by Jun Ishikawa