General features
| Gene ID | MPN356
|
| Type | CDS
|
| From | 425554
|
| To | 424241
|
| Strand | -
|
| General name | cysS
|
| Definition | cysteinyl-tRNA synthetase
|
| nt length | 1314
|
| aa length | 437
|
| m.w. | 50664.56
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE220 cysS cysteinyl-tRNA synthetase 32759:34078 | 304 | 3.9e-101
|
| mgen | WP_014894005.1 cysteine--tRNA ligase [Mycoplasma genitalium] | 663 | 0.0e+00
|
| mpul | WP_010924981.1 DUF402 domain-containing protein [Mycoplasma pulmonis] | 230 | 4.6e-71
|
| mmob | WP_011264668.1 cysteine--tRNA ligase [Mycoplasma mobile] | 256 | 6.1e-83
|
| mmyc | NP_975926.1 cysteinyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 278 | 3.6e-91
|
| mgal | WP_011113940.1 cysteine--tRNA ligase [Mycoplasma gallisepticum] | 353 | 1.4e-120
|
| uure | WP_012560267.1 cysteine--tRNA ligase [Ureaplasma urealyticum] | 322 | 3.4e-108
|
| phyt | WP_011160516.1 cysteine--tRNA ligase [Onion yellows phytoplasma] | 254 | 5.9e-82
|
| bsub | NP_387975.1 dual cysteinyl-tRNA synthetase; cysteine persulfide synthase [Bacillus subtilis subsp. subtilis str. 168] | 264 | 1.1e-84
|
| cace | WP_010966454.1 MULTISPECIES: cysteine--tRNA ligase [Clostridium] | 247 | 3.2e-78
|
| ecoli | NP_415059.1 cysteine--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 240 | 1.9e-75
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA-synt_1e | 1 | tRNA synthetases class I (C) catalytic domain | 20-309 | 403.8 | 4.8e-121
|
| tRNA-synt_1g | 1 | tRNA synthetases class I (M) | 36-109 | 39.5 | 2.9e-10
|
| DALR_2 | 1 | DALR domain | 346-399 | 29.4 | 8.5e-07
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874712.1| cysteine--tRNA ligase [Mycoplasma pneumoniae] | 437/437 (100%) | 2329 | 0.0e+00
|
| ref|WP_054173282.1| cysteine--tRNA ligase [Mycoplasma pneumoniae] | 436/437 (99%) | 2324 | 0.0e+00
|
| ref|WP_014325481.1| cysteine--tRNA ligase [Mycoplasma pneumoniae] | 435/437 (99%) | 2320 | 0.0e+00
|
| ref|WP_014894005.1| cysteine--tRNA ligase [Mycoplasma genitalium] | 312/437 (71%) | 1711 | 0.0e+00
|
| ref|WP_159243736.1| cysteine--tRNA ligase, partial [Mycoplasma pneumoniae] | 243/243 (100%) | 1303 | 2.8e-178
|
| ref|WP_159204832.1| class I tRNA ligase family protein, partial [Mycoplasma pneumoniae] | 217/219 (99%) | 1155 | 4.0e-156
|
| ref|WP_027123786.1| cysteine--tRNA ligase [Mycoplasma pirum] | 196/428 (45%) | 991 | 7.1e-128
|
| ref|WP_027119597.1| cysteine--tRNA ligase [Mycoplasma testudinis] | 193/428 (45%) | 984 | 7.7e-127
|
| ref|WP_033160017.1| cysteine--tRNA ligase [Mycoplasma alvi] | 192/417 (46%) | 965 | 5.9e-124
|
| ref|WP_014574794.1| cysteine--tRNA ligase [Mycoplasma gallisepticum] | 183/428 (42%) | 923 | 1.1e-117
|
Maintained by Jun Ishikawa