General features
| Gene ID | MPN355
|
| Type | CDS
|
| From | 424238
|
| To | 423510
|
| Strand | -
|
| General name | yacO
|
| Definition | tRNA/rRNA methyltransferase-like protein
|
| nt length | 729
|
| aa length | 242
|
| m.w. | 27775.24
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE230 spoU rRNA methylase 34086:34802 | 147 | 3.2e-45
|
| mgen | WP_010869393.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma genitalium] | 328 | 7.1e-117
|
| mpul | WP_010924982.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pulmonis] | 101 | 1.2e-27
|
| mmob | WP_011264667.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma mobile] | 95 | 9.4e-26
|
| mmyc | NP_975927.1 rRNA methylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 121 | 2.8e-35
|
| mgal | WP_011113939.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gallisepticum] | 216 | 7.2e-72
|
| uure | WP_004025602.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Ureaplasma] | 187 | 6.0e-61
|
| phyt | WP_101674489.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Onion yellows phytoplasma] | 114 | 1.0e-32
|
| bsub | NP_387977.1 23S rRNA (Gm2251)-methyltransferase [Bacillus subtilis subsp. subtilis str. 168] | 109 | 4.1e-30
|
| cace | WP_010966431.1 MULTISPECIES: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Clostridium] | 114 | 5.2e-32
|
| ecoli | NP_418601.1 23S rRNA 2'-O-ribose G2251 methyltransferase [Escherichia coli str. K-12 substr. MG1655] | 95 | 9.9e-25
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| SpoU_methylase | 1 | SpoU rRNA Methylase family | 97-238 | 132.0 | 1.7e-38
|
| SpoU_sub_bind | 1 | RNA 2'-O ribose methyltransferase substrate binding | 10-77 | 44.9 | 1e-11
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874711.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pne... | 242/242 (100%) | 1290 | 1.6e-179
|
| ref|WP_058157834.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pne... | 241/242 (99%) | 1285 | 9.9e-179
|
| ref|WP_014325480.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma pne... | 240/242 (99%) | 1272 | 9.0e-177
|
| ref|WP_010869393.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gen... | 151/242 (62%) | 842 | 2.4e-111
|
| ref|WP_014574793.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal... | 119/240 (49%) | 558 | 5.9e-68
|
| ref|WP_065164900.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal... | 119/240 (49%) | 557 | 9.3e-68
|
| ref|WP_151059848.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal... | 119/240 (49%) | 557 | 9.4e-68
|
| ref|WP_014886266.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal... | 117/232 (50%) | 554 | 2.7e-67
|
| ref|WP_084266103.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma tes... | 111/240 (46%) | 553 | 2.7e-67
|
| ref|WP_011883490.1| 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Mycoplasma gal... | 118/240 (49%) | 551 | 5.9e-67
|
Maintained by Jun Ishikawa