General features
| Gene ID | MPN354
|
| Type | CDS
|
| From | 423488
|
| To | 422139
|
| Strand | -
|
| General name | grs1
|
| Definition | glycyl-tRNA synthetase
|
| nt length | 1350
|
| aa length | 449
|
| m.w. | 52303.42
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE3390 glyS glycyl-tRNA synthetase 440246:441634 | 501 | 7.5e-178
|
| mgen | WP_010869392.1 glycine--tRNA ligase [Mycoplasma genitalium] | 671 | 0.0e+00
|
| mpul | WP_041364410.1 glycine--tRNA ligase [Mycoplasma pulmonis] | 394 | 2.7e-136
|
| mmob | WP_011264812.1 glycine--tRNA ligase [Mycoplasma mobile] | 396 | 5.3e-137
|
| mmyc | NP_975450.1 glycyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 407 | 3.9e-141
|
| mgal | WP_011113637.1 glycine--tRNA ligase [Mycoplasma gallisepticum] | 481 | 2.7e-170
|
| uure | WP_004025511.1 glycine--tRNA ligase [Ureaplasma urealyticum] | 435 | 8.1e-152
|
| phyt | WP_011160975.1 glycine--tRNA ligase [Onion yellows phytoplasma] | 370 | 7.3e-127
|
| cace | WP_010966472.1 MULTISPECIES: glycine--tRNA ligase [Clostridium] | 388 | 5.2e-133
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; cace, Clostridium acetobutylicum;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| HGTP_anticodon | 1 | Anticodon binding domain | 355-443 | 69.4 | 2.1e-19
|
| tRNA-synt_2b | 1 | tRNA synthetase class II core domain (G, H, P, S and T) | 149-270 | 40.5 | 2.7e-10
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874710.1| glycine--tRNA ligase [Mycoplasma pneumoniae] | 449/449 (100%) | 2401 | 0.0e+00
|
| ref|WP_161609213.1| glycine--tRNA ligase [Mycoplasma pneumoniae] | 448/449 (99%) | 2398 | 0.0e+00
|
| ref|WP_054175805.1| glycine--tRNA ligase [Mycoplasma pneumoniae] | 448/449 (99%) | 2395 | 0.0e+00
|
| ref|WP_010869392.1| glycine--tRNA ligase [Mycoplasma genitalium] | 317/444 (71%) | 1731 | 0.0e+00
|
| ref|WP_011077168.1| glycine--tRNA ligase [Mycoplasma penetrans] | 236/437 (54%) | 1290 | 1.1e-172
|
| ref|WP_027121897.1| glycine--tRNA ligase [Mycoplasma imitans] | 241/438 (55%) | 1255 | 2.2e-167
|
| ref|WP_011884454.1| glycine--tRNA ligase [Mycoplasma gallisepticum] | 240/435 (55%) | 1255 | 2.6e-167
|
| ref|WP_151029812.1| glycine--tRNA ligase [Mycoplasma gallisepticum] | 237/435 (54%) | 1249 | 2.3e-166
|
| ref|WP_027119949.1| glycine--tRNA ligase [Mycoplasma testudinis] | 223/432 (51%) | 1248 | 2.8e-166
|
| ref|WP_014886040.1| glycine--tRNA ligase [Mycoplasma gallisepticum] | 237/435 (54%) | 1245 | 7.4e-166
|
Maintained by Jun Ishikawa