General features

Gene IDMPN353
TypeCDS
From422155
To420293
Strand-
General namednaE
DefinitionDNA primase
nt length1863
aa length620
m.w.71536.77
COG[L] Replication, recombination and repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE3400 dnaG DNA primase 441624:4436901946.5e-55
mgenWP_009885788.1 DNA primase [Mycoplasma genitalium]5550.0e+00
mpulWP_010925254.1 DNA primase [Mycoplasma pulmonis]1362.2e-35
mmobWP_011264811.1 DNA primase [Mycoplasma mobile]1541.1e-41
mmycNP_975451.1 DNA primase [Mycoplasma mycoides subsp. mycoides SC str. PG1]1644.4e-45
mgalWP_011113636.1 DNA primase [Mycoplasma gallisepticum]1721.3e-47
uureWP_004026255.1 DNA primase [Ureaplasma urealyticum]1526.1e-41
phytWP_011160976.1 DNA primase [Onion yellows phytoplasma]1352.0e-35
bsubNP_390400.2 DNA primase [Bacillus subtilis subsp. subtilis str. 168]1591.7e-42
caceWP_010964611.1 MULTISPECIES: DNA primase [Clostridium]1336.3e-34
ecoliNP_417538.1 DNA primase [Escherichia coli str. K-12 substr. MG1655]1463.0e-38

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

zf-CHC21CHC2 zinc finger4-98114.02.1e-33

Toprim_N1DNA primase catalytic core, N-terminal domain123-261109.98.3e-32

Toprim_21Toprim-like269-35855.17.7e-15

Toprim_41Toprim domain268-34546.24.9e-12

Toprim_31Toprim domain268-36432.11.1e-07

Toprim1Toprim domain268-33629.56.7e-07

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874709.1| DNA primase [Mycoplasma pneumoniae] 620/620 (100%)32900.0e+00
ref|WP_053344121.1| DNA primase [Mycoplasma pneumoniae]619/620 (99%)32850.0e+00
ref|WP_159201749.1| DNA primase [Mycoplasma pneumoniae]619/619 (100%)32810.0e+00
ref|WP_014325479.1| DNA primase [Mycoplasma pneumoniae]618/620 (99%)32790.0e+00
ref|WP_009885788.1| DNA primase [Mycoplasma genitalium]285/615 (46%)14310.0e+00
ref|WP_063626195.1| DNA primase [Mycoplasma gallinarum]144/433 (33%)5227.6e-54
ref|WP_051521809.1| DNA primase [Mycoplasma gallinarum]144/433 (33%)5191.9e-53
ref|WP_081459190.1| DNA primase, partial [Faecalitalea cylindroides]128/379 (33%)5114.0e-53
ref|WP_035400381.1| DNA primase [Faecalitalea cylindroides]128/379 (33%)5106.1e-53
ref|WP_087319819.1| DNA primase [Faecalitalea cylindroides]128/379 (33%)5091.0e-52

Maintained by Jun Ishikawa