General features

Gene IDMYPE3400
TypeCDS
From441624
To443690
Strand+
General namednaG
DefinitionDNA primase
nt length2067
aa length688
m.w.80720.79
COG[L] Replication, recombination and repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN353 dnaE DNA primase 422155:4202931935.5e-55
mgenWP_009885788.1 DNA primase [Mycoplasma genitalium]1861.2e-52
mpulWP_010925254.1 DNA primase [Mycoplasma pulmonis]1625.8e-44
mmobWP_011264811.1 DNA primase [Mycoplasma mobile]1994.2e-57
mmycNP_975451.1 DNA primase [Mycoplasma mycoides subsp. mycoides SC str. PG1]1943.1e-55
mgalWP_011113636.1 DNA primase [Mycoplasma gallisepticum]1982.9e-56
uureWP_004026255.1 DNA primase [Ureaplasma urealyticum]2247.7e-66
phytWP_011160976.1 DNA primase [Onion yellows phytoplasma]1815.7e-51
bsubNP_390400.2 DNA primase [Bacillus subtilis subsp. subtilis str. 168]1786.9e-49
caceWP_010964611.1 MULTISPECIES: DNA primase [Clostridium]1991.5e-56
ecoliNP_417538.1 DNA primase [Escherichia coli str. K-12 substr. MG1655]1874.1e-52

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Toprim_N1DNA primase catalytic core, N-terminal domain128-257120.83.7e-35

zf-CHC21CHC2 zinc finger8-97105.21.2e-30

Toprim_21Toprim-like268-35667.69.9e-19

Toprim_41Toprim domain266-33966.52.2e-18

Toprim_31Toprim domain267-35943.14.2e-11

Toprim1Toprim domain266-33433.34.4e-08

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077169.1| DNA primase [Mycoplasma penetrans]688/688 (100%)35740.0e+00
ref|WP_129374546.1| DNA primase [Mycoplasma penetrans]687/688 (99%)35670.0e+00
ref|WP_004024999.1| DNA primase [Mycoplasma iowae]217/453 (47%)9861.5e-120
ref|WP_129692663.1| DNA primase [Mycoplasma iowae]217/453 (47%)9851.9e-120
ref|WP_051790318.1| DNA primase [Mycoplasma iowae]216/453 (47%)9817.6e-120
ref|WP_052663531.1| DNA primase [Mycoplasma testudinis]145/357 (40%)6876.0e-77
ref|WP_036448666.1| DNA primase [Mycoplasma pirum]161/427 (37%)6025.7e-65
ref|WP_118432380.1| MULTISPECIES: DNA primase [Erysipelotrichaceae]137/395 (34%)5812.0e-62
ref|WP_038101873.1| DNA primase [Ureaplasma diversum]141/371 (38%)5863.7e-62
ref|WP_096232315.1| DNA primase [Thermoanaerobacterium sp. RBIITD]146/399 (36%)5701.0e-60

Maintained by Jun Ishikawa