General features
| Gene ID | MYPE3380
|
| Type | CDS
|
| From | 439516
|
| To | 440220
|
| Strand | +
|
| General name |
|
| Definition | conserved hypothetical protein
|
| nt length | 705
|
| aa length | 234
|
| m.w. | 27153.29
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpul | WP_010924963.1 DNA repair protein RecO [Mycoplasma pulmonis] | 57 | 1.3e-11
|
| mmob | WP_041362907.1 DNA repair protein RecO [Mycoplasma mobile] | 63 | 6.0e-14
|
| mmyc | NP_975449.1 DNA repair protein recO [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 43 | 8.5e-07
|
| mgal | WP_011113638.1 DNA repair protein RecO [Mycoplasma gallisepticum] | 62 | 3.4e-13
|
| uure | WP_004026356.1 DNA repair protein RecO [Ureaplasma urealyticum] | 105 | 2.8e-29
|
| bsub | NP_390406.2 DNA double strand break repair and homologous recombination factor [Bacillus subtilis subsp. subtilis str. 168] | 40 | 4.0e-05
|
| cace | WP_014518908.1 MULTISPECIES: DNA repair protein RecO [Clostridium] | 36 | 1.0e-03
|
| ecoli | NP_418330.1 formate dehydrogenase O subunit alpha [Escherichia coli str. K-12 substr. MG1655] | 28 | 6.5e-01
|
*mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| RecO_C | 1 | Recombination protein O C terminal | 126-225 | 32.2 | 8.4e-08
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077167.1| DNA repair protein RecO [Mycoplasma penetrans] | 234/234 (100%) | 1185 | 7.3e-164
|
| ref|WP_004024996.1| DNA repair protein RecO [Mycoplasma iowae] | 98/230 (42%) | 389 | 6.5e-43
|
| ref|WP_088409168.1| DNA repair protein RecO [Ureaplasma parvum] | 73/172 (42%) | 276 | 5.3e-26
|
| ref|WP_006689072.1| DNA repair protein RecO [Ureaplasma parvum] | 72/172 (41%) | 270 | 3.6e-25
|
| ref|WP_045470405.1| DNA repair protein RecO [Ureaplasma parvum] | 72/172 (41%) | 270 | 4.1e-25
|
| ref|WP_114119943.1| DNA repair protein RecO [Ureaplasma urealyticum] | 83/207 (40%) | 266 | 1.3e-24
|
| ref|WP_006688501.1| DNA repair protein RecO [Ureaplasma parvum] | 71/172 (41%) | 265 | 1.7e-24
|
| ref|WP_010891799.1| DNA repair protein RecO [Ureaplasma parvum] | 71/172 (41%) | 265 | 2.1e-24
|
| ref|WP_004026356.1| DNA repair protein RecO [Ureaplasma urealyticum] | 83/207 (40%) | 261 | 6.7e-24
|
| ref|WP_004025604.1| DNA repair protein RecO [Ureaplasma urealyticum] | 82/207 (39%) | 257 | 3.1e-23
|
Maintained by Jun Ishikawa