General features
| Gene ID | MPN327
|
| Type | CDS
|
| From | 386427
|
| To | 386741
|
| Strand | +
|
| General name | rpmA
|
| Definition | ribosomal protein L27
|
| nt length | 315
|
| aa length | 104
|
| m.w. | 11504.26
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE4440 rpmA ribosomal protein L27 580240:580527 | 127 | 2.3e-41
|
| mgen | WP_009885771.1 50S ribosomal protein L27 [Mycoplasma genitalium] | 163 | 6.5e-56
|
| mpul | WP_010925133.1 50S ribosomal protein L27 [Mycoplasma pulmonis] | 91 | 2.0e-27
|
| mmob | WP_011264825.1 50S ribosomal protein L27 [Mycoplasma mobile] | 82 | 5.5e-24
|
| mmyc | NP_975544.1 50S ribosomal protein L27 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 124 | 1.9e-40
|
| mgal | WP_011113615.1 50S ribosomal protein L27 [Mycoplasma gallisepticum] | 125 | 7.9e-41
|
| uure | WP_012560236.1 50S ribosomal protein L27 [Ureaplasma urealyticum] | 114 | 3.6e-36
|
| phyt | WP_011160463.1 MULTISPECIES: 50S ribosomal protein L27 [Candidatus Phytoplasma asteris] | 114 | 2.0e-36
|
| bsub | NP_390672.1 ribosomal protein L27 (BL24) [Bacillus subtilis subsp. subtilis str. 168] | 124 | 1.3e-39
|
| cace | WP_010964571.1 MULTISPECIES: 50S ribosomal protein L27 [Clostridium] | 105 | 3.0e-32
|
| ecoli | NP_417652.1 50S ribosomal subunit protein L27 [Escherichia coli str. K-12 substr. MG1655] | 85 | 2.7e-24
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L27 | 1 | Ribosomal L27 protein | 16-97 | 113.5 | 3.5e-33
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874683.1| 50S ribosomal protein L27 [Mycoplasma pneumoniae] | 104/104 (100%) | 534 | 9.4e-69
|
| ref|WP_014325462.1| 50S ribosomal protein L27 [Mycoplasma pneumoniae] | 103/104 (99%) | 527 | 1.1e-67
|
| ref|WP_054175518.1| 50S ribosomal protein L27 [Mycoplasma pneumoniae] | 103/104 (99%) | 513 | 1.7e-65
|
| ref|WP_014894232.1| 50S ribosomal protein L27 [Mycoplasma genitalium] | 76/104 (73%) | 418 | 4.2e-51
|
| ref|WP_009885771.1| 50S ribosomal protein L27 [Mycoplasma genitalium] | 75/104 (72%) | 413 | 2.2e-50
|
| ref|WP_052663085.1| 50S ribosomal protein L27 [Mycoplasma pirum] | 68/102 (66%) | 337 | 9.4e-39
|
| ref|WP_105298283.1| 50S ribosomal protein L27 [Spiroplasma sp. ChiS] | 66/93 (70%) | 332 | 3.7e-38
|
| ref|WP_070407250.1| MULTISPECIES: 50S ribosomal protein L27 [unclassified Spiroplasma] | 66/88 (75%) | 331 | 5.0e-38
|
| ref|WP_114565578.1| 50S ribosomal protein L27 [Spiroplasma phoeniceum] | 66/88 (75%) | 331 | 6.4e-38
|
| ref|WP_145661470.1| MULTISPECIES: 50S ribosomal protein L27 [unclassified Paenibacillus] | 61/89 (68%) | 331 | 6.4e-38
|
Maintained by Jun Ishikawa