General features
| Gene ID | MPN325
|
| Type | CDS
|
| From | 385837
|
| To | 386139
|
| Strand | +
|
| General name | rplU
|
| Definition | ribosomal protein L21
|
| nt length | 303
|
| aa length | 100
|
| m.w. | 11638.76
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE4420 rpL21 ribosomal protein L21 579621:579923 | 98 | 5.9e-30
|
| mgen | WP_009885769.1 50S ribosomal protein L21 [Mycoplasma genitalium] | 174 | 4.7e-60
|
| mpul | WP_010925134.1 50S ribosomal protein L21 [Mycoplasma pulmonis] | 90 | 5.1e-27
|
| mmob | WP_011264824.1 50S ribosomal protein L21 [Mycoplasma mobile] | 98 | 4.9e-30
|
| mmyc | NP_975546.1 50S ribosomal protein L21 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 81 | 2.4e-23
|
| mgal | WP_011113613.1 50S ribosomal protein L21 [Mycoplasma gallisepticum] | 118 | 4.8e-38
|
| uure | WP_004025926.1 50S ribosomal protein L21 [Ureaplasma urealyticum] | 94 | 1.2e-28
|
| phyt | WP_041624647.1 MULTISPECIES: 50S ribosomal protein L21 [Candidatus Phytoplasma asteris] | 51 | 6.1e-12
|
| bsub | NP_390674.1 ribosomal protein L21 (BL20) [Bacillus subtilis subsp. subtilis str. 168] | 74 | 6.4e-20
|
| cace | WP_010964569.1 50S ribosomal protein L21 [Clostridium acetobutylicum] | 69 | 6.1e-18
|
| ecoli | NP_417653.1 50S ribosomal subunit protein L21 [Escherichia coli str. K-12 substr. MG1655] | 64 | 6.0e-16
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L21p | 1 | Ribosomal prokaryotic L21 protein | 1-95 | 99.9 | 7.7e-29
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874681.1| 50S ribosomal protein L21 [Mycoplasma pneumoniae] | 100/100 (100%) | 513 | 1.0e-65
|
| ref|WP_009885769.1| 50S ribosomal protein L21 [Mycoplasma genitalium] | 82/100 (82%) | 440 | 1.6e-54
|
| ref|WP_033159752.1| 50S ribosomal protein L21 [Mycoplasma alvi] | 69/97 (71%) | 374 | 1.4e-44
|
| ref|WP_027124074.1| 50S ribosomal protein L21 [Mycoplasma pirum] | 62/95 (65%) | 346 | 3.3e-40
|
| ref|WP_027119316.1| 50S ribosomal protein L21 [Mycoplasma testudinis] | 59/100 (59%) | 325 | 5.1e-37
|
| ref|WP_011113613.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum] | 58/99 (58%) | 296 | 1.0e-32
|
| ref|WP_011884417.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum] | 58/99 (58%) | 296 | 1.3e-32
|
| ref|WP_014574617.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum] | 58/99 (58%) | 295 | 1.6e-32
|
| ref|WP_014886016.1| 50S ribosomal protein L21 [Mycoplasma gallisepticum] | 58/99 (58%) | 297 | 1.7e-32
|
| ref|WP_156920490.1| 50S ribosomal protein L21 [Mycoplasma imitans] | 58/99 (58%) | 295 | 3.1e-32
|
Maintained by Jun Ishikawa