General features
| Gene ID | MYPE320
|
| Type | CDS
|
| From | 42293
|
| To | 43477
|
| Strand | +
|
| General name | tufA
|
| Definition | elongation factor Tu
|
| nt length | 1185
|
| aa length | 394
|
| m.w. | 43074.00
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN665 tuf elongation factor TU 789325:788141 | 649 | 0.0e+00
|
| mgen | WP_009885583.1 elongation factor Tu [Mycoplasma genitalium] | 650 | 0.0e+00
|
| mpul | WP_010925206.1 elongation factor Tu [Mycoplasma pulmonis] | 611 | 0.0e+00
|
| mmob | WP_011264744.1 elongation factor Tu [Mycoplasma mobile] | 582 | 0.0e+00
|
| mmyc | NP_975163.1 elongation factor Tu [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 598 | 0.0e+00
|
| mgal | WP_011113468.1 elongation factor Tu [Mycoplasma gallisepticum] | 664 | 0.0e+00
|
| uure | WP_004025523.1 elongation factor Tu [Ureaplasma urealyticum] | 644 | 0.0e+00
|
| phyt | WP_011160639.1 MULTISPECIES: elongation factor Tu [Candidatus Phytoplasma] | 577 | 0.0e+00
|
| bsub | NP_387994.1 elongation factor Tu [Bacillus subtilis subsp. subtilis str. 168] | 583 | 0.0e+00
|
| cace | WP_010963437.1 MULTISPECIES: GTP-binding protein [Clostridium] | 114 | 1.0e-28
|
| ecoli | NP_417798.1 translation elongation factor Tu 1 [Escherichia coli str. K-12 substr. MG1655] | 585 | 0.0e+00
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| GTP_EFTU | 1 | Elongation factor Tu GTP binding domain | 11-201 | 208.9 | 4.9e-62
|
| GTP_EFTU_D3 | 1 | Elongation factor Tu C-terminal domain | 298-392 | 107.5 | 4.2e-31
|
| GTP_EFTU_D2 | 1 | Elongation factor Tu domain 2 | 225-293 | 67.9 | 7.6e-19
|
| MMR_HSR1 | 1 | 50S ribosome-binding GTPase | 15-134 | 24.7 | 1.9e-05
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011076858.1| elongation factor Tu [Mycoplasma penetrans] | 394/394 (100%) | 2080 | 0.0e+00
|
| ref|WP_129374357.1| elongation factor Tu [Mycoplasma penetrans] | 393/394 (99%) | 2077 | 0.0e+00
|
| ref|WP_004025345.1| elongation factor Tu [Mycoplasma iowae] | 347/394 (88%) | 1858 | 0.0e+00
|
| ref|WP_033160076.1| elongation factor Tu [Mycoplasma alvi] | 323/393 (82%) | 1730 | 0.0e+00
|
| ref|WP_027123957.1| elongation factor Tu [Mycoplasma pirum] | 323/393 (82%) | 1728 | 0.0e+00
|
| ref|WP_027122125.1| elongation factor Tu [Mycoplasma imitans] | 319/394 (80%) | 1715 | 0.0e+00
|
| ref|WP_011113468.1| elongation factor Tu [Mycoplasma gallisepticum] | 319/394 (80%) | 1712 | 0.0e+00
|
| ref|WP_014885939.1| elongation factor Tu [Mycoplasma gallisepticum] | 319/394 (80%) | 1711 | 0.0e+00
|
| ref|WP_065164890.1| elongation factor Tu [Mycoplasma gallisepticum] | 319/394 (80%) | 1710 | 0.0e+00
|
| ref|WP_027119548.1| elongation factor Tu [Mycoplasma testudinis] | 317/393 (80%) | 1710 | 0.0e+00
|
Maintained by Jun Ishikawa