General features

Gene IDMYPE3120
TypeCDS
From404290
To403859
Strand-
General name
DefinitionRrf2 family transcriptional regulator
nt length432
aa length143
m.w.16245.74
COG[K] Transcription

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
uureWP_004027090.1 membrane protein [Ureaplasma urealyticum]306.9e-03
bsubNP_391544.1 putative transcriptional regulator [Bacillus subtilis subsp. subtilis str. 168]1141.2e-34
caceWP_010966791.1 MULTISPECIES: Rrf2 family transcriptional regulator [Clostridium]391.6e-05
ecoliNP_417565.2 DNA-binding transcriptional repressor ExuR [Escherichia coli str. K-12 substr. MG1655]332.4e-03

*uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Rrf21Transcriptional regulator1-8283.31.1e-23

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_011077140.1| Rrf2 family transcriptional regulator [Mycoplasma penetrans]143/143 (100%)7344.7e-98
ref|WP_107631810.1| Rrf2 family transcriptional regulator [Intestinibacillus sp. Marseille...107/142 (75%)5845.6e-75
ref|WP_117995965.1| Rrf2 family transcriptional regulator [Eubacterium sp. AF22-8LB]107/142 (75%)5827.7e-75
ref|WP_118324930.1| Rrf2 family transcriptional regulator [Holdemanella biformis]106/142 (74%)5783.7e-74
ref|WP_004609853.1| Rrf2 family transcriptional regulator [[Clostridium] spiroforme]106/142 (74%)5741.1e-73
ref|WP_117604816.1| Rrf2 family transcriptional regulator [[Clostridium] spiroforme]106/142 (74%)5741.1e-73
ref|WP_087255506.1| Rrf2 family transcriptional regulator [[Clostridium] spiroforme]105/142 (73%)5731.7e-73
ref|WP_004614710.1| MULTISPECIES: Rrf2 family transcriptional regulator [Lachnospiraceae]103/142 (72%)5732.0e-73
ref|WP_087391602.1| Rrf2 family transcriptional regulator [[Clostridium] spiroforme]104/142 (73%)5723.2e-73
ref|WP_118512640.1| MULTISPECIES: Rrf2 family transcriptional regulator [Clostridiales]99/143 (69%)5695.9e-73

Maintained by Jun Ishikawa