General features
| Gene ID | MYPE3050
|
| Type | CDS
|
| From | 395882
|
| To | 395232
|
| Strand | -
|
| General name | rpe
|
| Definition | d-ribulose-5-phosphate 3 epimerase
|
| nt length | 651
|
| aa length | 216
|
| m.w. | 24823.45
|
| COG | [G] Carbohydrate transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN251 cfxE D-ribulose-5-phosphate 3 epimerase 302383:303030 | 96 | 1.6e-26
|
| mgen | WP_009885669.1 ribulose-phosphate 3-epimerase [Mycoplasma genitalium] | 103 | 1.7e-29
|
| mpul | WP_010925484.1 ribulose-phosphate 3-epimerase [Mycoplasma pulmonis] | 114 | 2.8e-33
|
| mmob | WP_011265081.1 ribulose-phosphate 3-epimerase [Mycoplasma mobile] | 114 | 2.9e-33
|
| mmyc | NP_975304.1 ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 115 | 1.5e-33
|
| mgal | WP_011113895.1 ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum] | 100 | 7.5e-28
|
| uure | WP_004026029.1 ribulose-phosphate 3-epimerase [Ureaplasma urealyticum] | 130 | 1.5e-39
|
| bsub | NP_389461.1 ribulose-5-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis str. 168] | 97 | 3.2e-26
|
| cace | WP_010965037.1 MULTISPECIES: ribulose-phosphate 3-epimerase [Clostridium] | 111 | 1.7e-31
|
| ecoli | NP_418509.1 D-allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12 substr. MG1655] | 98 | 2.4e-26
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribul_P_3_epim | 1 | Ribulose-phosphate 3 epimerase family | 5-202 | 156.0 | 7.5e-46
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077133.1| ribulose-phosphate 3-epimerase [Mycoplasma penetrans] | 216/216 (100%) | 1106 | 2.2e-152
|
| ref|WP_004024661.1| ribulose-phosphate 3-epimerase [Mycoplasma iowae] | 103/216 (47%) | 487 | 3.2e-58
|
| ref|WP_004027256.1| ribulose-phosphate 3-epimerase [Ureaplasma urealyticum] | 83/211 (39%) | 333 | 6.1e-35
|
| ref|WP_066445431.1| ribulose-phosphate 3-epimerase [Longibaculum muris] | 77/185 (41%) | 330 | 1.4e-34
|
| ref|WP_004026029.1| ribulose-phosphate 3-epimerase [Ureaplasma urealyticum] | 83/211 (39%) | 328 | 3.6e-34
|
| ref|WP_102400628.1| ribulose-phosphate 3-epimerase [Haloimpatiens massiliensis] | 76/189 (40%) | 326 | 5.4e-34
|
| ref|WP_028505143.1| ribulose-phosphate 3-epimerase [Ruminococcus sp. FC2018] | 72/211 (34%) | 325 | 8.6e-34
|
| ref|WP_004803585.1| ribulose-phosphate 3-epimerase [Eggerthia catenaformis] | 78/192 (40%) | 324 | 9.7e-34
|
| ref|WP_086432549.1| ribulose-phosphate 3-epimerase [Eggerthia catenaformis] | 78/192 (40%) | 324 | 1.1e-33
|
| ref|WP_088437577.1| ribulose-phosphate 3-epimerase [Ureaplasma parvum] | 84/210 (40%) | 323 | 1.5e-33
|
Maintained by Jun Ishikawa