General features
| Gene ID | MYPE2870
|
| Type | CDS
|
| From | 375348
|
| To | 377090
|
| Strand | +
|
| General name | aspS
|
| Definition | aspartyl-tRNA synthetase
|
| nt length | 1743
|
| aa length | 580
|
| m.w. | 67118.71
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN046 aspS aspartyl-tRNA synthetase 54293:55966 | 418 | 3.9e-142
|
| mgen | WP_009885700.1 aspartate--tRNA ligase [Mycoplasma genitalium] | 400 | 2.1e-135
|
| mpul | WP_041364038.1 aspartate--tRNA ligase [Mycoplasma pulmonis] | 523 | 0.0e+00
|
| mmob | WP_011264794.1 aspartate--tRNA ligase [Mycoplasma mobile] | 519 | 0.0e+00
|
| mmyc | NP_975331.1 aspartyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 541 | 0.0e+00
|
| mgal | WP_011113417.1 aspartate--tRNA ligase [Mycoplasma gallisepticum] | 507 | 1.6e-176
|
| uure | WP_004025780.1 aspartate--tRNA ligase [Ureaplasma urealyticum] | 633 | 0.0e+00
|
| phyt | WP_011160503.1 aspartate--tRNA(Asp/Asn) ligase [Onion yellows phytoplasma] | 426 | 4.8e-145
|
| bsub | NP_390633.1 aspartyl-tRNA synthetase, promiscuous (also recognizes tRNAasn) [Bacillus subtilis subsp. subtilis str. 168] | 530 | 0.0e+00
|
| cace | WP_010965567.1 MULTISPECIES: aspartate--tRNA ligase [Clostridium] | 512 | 8.5e-178
|
| ecoli | NP_416380.1 aspartate--tRNA ligase [Escherichia coli str. K-12 substr. MG1655] | 466 | 6.9e-160
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| tRNA-synt_2 | 1 | tRNA synthetases class II (D, K and N) | 120-552 | 341.7 | 3.6e-102
|
| tRNA_anti-codon | 1 | OB-fold nucleic acid binding domain | 21-100 | 47.1 | 1.8e-12
|
| GAD | 1 | GAD domain | 308-399 | 41.4 | 1.3e-10
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077115.1| aspartate--tRNA ligase [Mycoplasma penetrans] | 580/580 (100%) | 3046 | 0.0e+00
|
| ref|WP_004024756.1| aspartate--tRNA ligase [Mycoplasma iowae] | 357/576 (61%) | 1875 | 0.0e+00
|
| ref|WP_036452673.1| aspartate--tRNA ligase [Mycoplasma iowae] | 356/576 (61%) | 1871 | 0.0e+00
|
| ref|WP_004025780.1| aspartate--tRNA ligase [Ureaplasma urealyticum] | 294/570 (51%) | 1633 | 0.0e+00
|
| ref|WP_114119902.1| aspartate--tRNA ligase [Ureaplasma urealyticum] | 294/570 (51%) | 1631 | 0.0e+00
|
| ref|WP_051749483.1| aspartate--tRNA ligase [Ureaplasma diversum] | 282/573 (49%) | 1582 | 0.0e+00
|
| ref|WP_006688860.1| aspartate--tRNA ligase [Ureaplasma parvum] | 287/573 (50%) | 1569 | 0.0e+00
|
| ref|WP_127092859.1| aspartate--tRNA ligase [Spiroplasma poulsonii] | 290/571 (50%) | 1561 | 0.0e+00
|
| ref|WP_040093505.1| aspartate--tRNA ligase [Spiroplasma poulsonii] | 290/571 (50%) | 1553 | 0.0e+00
|
| ref|WP_016338848.1| aspartate--tRNA ligase [Spiroplasma chrysopicola] | 288/572 (50%) | 1544 | 0.0e+00
|
Maintained by Jun Ishikawa