General features
| Gene ID | MYPE2820
|
| Type | CDS
|
| From | 369209
|
| To | 371023
|
| Strand | +
|
| General name | pepF
|
| Definition | oligoendopeptidase F
|
| nt length | 1815
|
| aa length | 604
|
| m.w. | 71255.48
|
| COG | [E] Amino acid transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN197 pepF oligoendopeptidase F 236529:238364 | 369 | 7.8e-122
|
| mgen | WP_009885868.1 oligoendopeptidase F [Mycoplasma genitalium] | 387 | 2.1e-129
|
| mpul | WP_010925125.1 oligoendopeptidase F [Mycoplasma pulmonis] | 249 | 3.3e-76
|
| mmob | WP_011264719.1 oligoendopeptidase F [Mycoplasma mobile] | 222 | 3.6e-66
|
| mmyc | NP_975237.1 oligoendopeptidase F [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 124 | 2.3e-31
|
| uure | WP_004025902.1 oligoendopeptidase F [Ureaplasma urealyticum] | 424 | 2.7e-143
|
| phyt | WP_011160553.1 M3 family oligoendopeptidase [Onion yellows phytoplasma] | 56 | 3.1e-10
|
| bsub | NP_389036.2 oligoendopeptidase F [Bacillus subtilis subsp. subtilis str. 168] | 182 | 1.2e-50
|
| ecoli | NP_416612.1 putative fimbrial usher protein YehB [Escherichia coli str. K-12 substr. MG1655] | 27 | 2.7e+00
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Peptidase_M3 | 1 | Peptidase family M3 | 196-587 | 151.4 | 4.8e-44
|
| Peptidase_M3_N | 1 | Oligopeptidase F | 110-172 | 43.9 | 2.1e-11
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077110.1| oligoendopeptidase F [Mycoplasma penetrans] | 604/604 (100%) | 3091 | 0.0e+00
|
| ref|WP_129374495.1| oligoendopeptidase F [Mycoplasma penetrans] | 603/604 (99%) | 3085 | 0.0e+00
|
| ref|WP_036451839.1| oligoendopeptidase F [Mycoplasma iowae] | 268/604 (44%) | 1226 | 1.7e-158
|
| ref|WP_004025231.1| oligoendopeptidase F [Mycoplasma iowae] | 267/604 (44%) | 1217 | 3.0e-157
|
| ref|WP_052663041.1| oligoendopeptidase F [Mycoplasma pirum] | 253/593 (42%) | 1187 | 2.3e-152
|
| ref|WP_033160011.1| oligoendopeptidase F [Mycoplasma alvi] | 248/594 (41%) | 1127 | 1.8e-143
|
| ref|WP_052663514.1| oligoendopeptidase F [Mycoplasma testudinis] | 231/600 (38%) | 1114 | 1.8e-141
|
| ref|WP_016829125.1| oligoendopeptidase F [Ureaplasma urealyticum] | 245/602 (40%) | 1093 | 1.5e-138
|
| ref|WP_114119947.1| oligoendopeptidase F [Ureaplasma urealyticum] | 245/602 (40%) | 1092 | 2.7e-138
|
| ref|WP_004027113.1| oligoendopeptidase F [Ureaplasma urealyticum] | 245/602 (40%) | 1091 | 3.5e-138
|
Maintained by Jun Ishikawa