General features
| Gene ID | MPN269
|
| Type | CDS
|
| From | 319703
|
| To | 321184
|
| Strand | +
|
| General name | ysr1
|
| Definition | nucleotide binding protein
|
| nt length | 1482
|
| aa length | 493
|
| m.w. | 56526.47
|
| COG | [R] General function prediction only
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE5440 predicted HD superfamily hydrolase 688066:686657 | 137 | 7.9e-37
|
| mgen | WP_010869346.1 ribonuclease Y [Mycoplasma genitalium] | 572 | 0.0e+00
|
| mmyc | NP_975408.1 phosphodiesterase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 95 | 1.6e-22
|
| mgal | WP_011113720.1 HDIG domain-containing protein [Mycoplasma gallisepticum] | 79 | 2.1e-17
|
| uure | WP_004025809.1 ribonuclease Y [Ureaplasma urealyticum] | 111 | 6.4e-28
|
| phyt | WP_041624932.1 ribonuclease Y [Onion yellows phytoplasma] | 97 | 2.4e-23
|
| bsub | NP_389578.1 endoribonuclease Y [Bacillus subtilis subsp. subtilis str. 168] | 86 | 6.6e-19
|
| cace | WP_010965122.1 MULTISPECIES: ribonuclease Y [Clostridium] | 95 | 7.3e-22
|
| ecoli | NP_417814.1 putative phosphoribulokinase [Escherichia coli str. K-12 substr. MG1655] | 28 | 6.7e-01
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| HD | 1 | HD domain | 300-391 | 43.4 | 3.6e-11
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874626.1| ribonuclease Y [Mycoplasma pneumoniae] | 493/493 (100%) | 2580 | 0.0e+00
|
| ref|WP_054175390.1| ribonuclease Y [Mycoplasma pneumoniae] | 492/493 (99%) | 2577 | 0.0e+00
|
| ref|WP_161609215.1| HDIG domain-containing protein [Mycoplasma pneumoniae] | 492/493 (99%) | 2577 | 0.0e+00
|
| ref|WP_054174928.1| ribonuclease Y [Mycoplasma pneumoniae] | 492/493 (99%) | 2575 | 0.0e+00
|
| ref|WP_159204505.1| HDIG domain-containing protein [Mycoplasma pneumoniae] | 492/493 (99%) | 2574 | 0.0e+00
|
| ref|WP_159227407.1| HDIG domain-containing protein [Mycoplasma pneumoniae] | 492/493 (99%) | 2573 | 0.0e+00
|
| ref|WP_014325429.1| ribonuclease Y [Mycoplasma pneumoniae] | 491/493 (99%) | 2570 | 0.0e+00
|
| ref|WP_161609636.1| HDIG domain-containing protein [Mycoplasma pneumoniae] | 490/493 (99%) | 2567 | 0.0e+00
|
| ref|WP_159241754.1| HDIG domain-containing protein [Mycoplasma pneumoniae] | 493/493 (100%) | 2566 | 0.0e+00
|
| ref|WP_161611424.1| HDIG domain-containing protein [Mycoplasma pneumoniae] | 490/493 (99%) | 2565 | 0.0e+00
|
Maintained by Jun Ishikawa