General features
| Gene ID | MPN259
|
| Type | CDS
|
| From | 309731
|
| To | 311284
|
| Strand | +
|
| General name |
|
| Definition | sugar (ribose/galactose) ABC transporter permease subunit, but probably C-terminal
|
| nt length | 1554
|
| aa length | 517
|
| m.w. | 58584.51
|
| COG | [R] General function prediction only
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE5880 ABC transporter permease 743138:741504 | 320 | 8.7e-105
|
| mgen | WP_009885676.1 ABC transporter permease [Mycoplasma genitalium] | 619 | 0.0e+00
|
| mpul | WP_010925419.1 ABC transporter permease [Mycoplasma pulmonis] | 108 | 1.3e-26
|
| mmob | WP_011264558.1 ABC transporter permease [Mycoplasma mobile] | 111 | 7.4e-28
|
| mmyc | NP_975020.1 ribose/galactose ABC transporter permease [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 130 | 1.6e-33
|
| mgal | WP_011113845.1 ABC transporter permease [Mycoplasma gallisepticum] | 275 | 1.1e-87
|
| uure | WP_012560185.1 sugar ABC transporter [Ureaplasma urealyticum] | 171 | 1.4e-47
|
| bsub | NP_391034.1 permease of ABC guanosine transporter [Bacillus subtilis subsp. subtilis str. 168] | 83 | 2.8e-18
|
| cace | WP_010964023.1 MULTISPECIES: ABC transporter permease [Clostridium] | 63 | 8.2e-12
|
| ecoli | NP_416031.1 Autoinducer-2 ABC transporter membrane subunit LsrC [Escherichia coli str. K-12 substr. MG1655] | 33 | 2.2e-02
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| BPD_transp_2 | 1 | Branched-chain amino acid transport system / permease component | 73-363 | 163.5 | 5.5e-48
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874616.1| ABC transporter permease [Mycoplasma pneumoniae] | 517/517 (100%) | 2714 | 0.0e+00
|
| ref|WP_014325424.1| ABC transporter permease [Mycoplasma pneumoniae] | 515/517 (99%) | 2707 | 0.0e+00
|
| ref|WP_014574924.1| ABC transporter permease [Mycoplasma pneumoniae] | 514/517 (99%) | 2699 | 0.0e+00
|
| ref|WP_098363675.1| ABC transporter permease [Mycoplasma pneumoniae] | 514/517 (99%) | 2699 | 0.0e+00
|
| ref|WP_129639293.1| ABC transporter permease [Mycoplasma pneumoniae] | 513/517 (99%) | 2689 | 0.0e+00
|
| ref|WP_014894155.1| ABC transporter permease [Mycoplasma genitalium] | 312/487 (64%) | 1600 | 0.0e+00
|
| ref|WP_009885676.1| ABC transporter permease [Mycoplasma genitalium] | 311/487 (63%) | 1596 | 0.0e+00
|
| ref|WP_014893943.1| ABC transporter permease [Mycoplasma genitalium] | 310/487 (63%) | 1588 | 0.0e+00
|
| ref|WP_052664028.1| ABC transporter permease [Mycoplasma alvi] | 207/478 (43%) | 854 | 9.1e-104
|
| ref|WP_011077410.1| ABC transporter permease [Mycoplasma penetrans] | 177/393 (45%) | 820 | 1.3e-99
|
Maintained by Jun Ishikawa