General features
| Gene ID | MPN251
|
| Type | CDS
|
| From | 302383
|
| To | 303030
|
| Strand | +
|
| General name | cfxE
|
| Definition | D-ribulose-5-phosphate 3 epimerase
|
| nt length | 648
|
| aa length | 215
|
| m.w. | 24834.66
|
| COG | [G] Carbohydrate transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE3050 rpe d-ribulose-5-phosphate 3 epimerase 395882:395232 | 96 | 2.6e-26
|
| mgen | WP_009885669.1 ribulose-phosphate 3-epimerase [Mycoplasma genitalium] | 270 | 1.0e-94
|
| mpul | WP_010925484.1 ribulose-phosphate 3-epimerase [Mycoplasma pulmonis] | 59 | 1.9e-12
|
| mmob | WP_011265081.1 ribulose-phosphate 3-epimerase [Mycoplasma mobile] | 62 | 1.1e-13
|
| mmyc | NP_975387.1 ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 68 | 7.7e-16
|
| mgal | WP_011113895.1 ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum] | 155 | 4.3e-49
|
| uure | WP_004026029.1 ribulose-phosphate 3-epimerase [Ureaplasma urealyticum] | 101 | 2.6e-28
|
| phyt | WP_011160484.1 hypothetical protein [Onion yellows phytoplasma] | 28 | 4.3e-02
|
| bsub | NP_389461.1 ribulose-5-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis str. 168] | 67 | 1.1e-14
|
| cace | WP_010965037.1 MULTISPECIES: ribulose-phosphate 3-epimerase [Clostridium] | 61 | 1.5e-12
|
| ecoli | NP_417845.1 ribulose-phosphate 3-epimerase [Escherichia coli str. K-12 substr. MG1655] | 88 | 1.4e-22
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribul_P_3_epim | 1 | Ribulose-phosphate 3 epimerase family | 9-199 | 220.9 | 1e-65
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874608.1| ribulose-phosphate 3-epimerase [Mycoplasma pneumoniae] | 214/215 (99%) | 1119 | 2.4e-154
|
| ref|WP_159201658.1| ribulose-phosphate 3-epimerase [Mycoplasma pneumoniae] | 213/215 (99%) | 1109 | 6.4e-153
|
| ref|WP_009885669.1| ribulose-phosphate 3-epimerase [Mycoplasma genitalium] | 137/205 (66%) | 690 | 3.3e-89
|
| ref|WP_014894394.1| ribulose-phosphate 3-epimerase [Mycoplasma genitalium] | 137/205 (66%) | 689 | 4.7e-89
|
| ref|WP_027122171.1| ribulose-phosphate 3-epimerase [Mycoplasma imitans] | 88/204 (43%) | 406 | 5.6e-46
|
| ref|WP_011883406.1| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum] | 85/205 (41%) | 392 | 6.2e-44
|
| ref|WP_151059828.1| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum] | 85/204 (41%) | 391 | 9.2e-44
|
| ref|WP_011113895.1| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum] | 85/204 (41%) | 391 | 9.4e-44
|
| ref|WP_014886240.1| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum] | 85/204 (41%) | 391 | 1.1e-43
|
| ref|WP_014574765.1| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum] | 85/204 (41%) | 390 | 1.2e-43
|
Maintained by Jun Ishikawa