General features

Gene IDMYPE2490
TypeCDS
From308379
To308014
Strand-
General namehupA
DefinitionDNA-binding histone-like protein HU-alpha
nt length366
aa length121
m.w.14039.18
COG[L] Replication, recombination and repair

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN529 bacterial histone-like protein 651246:650917311.1e-03
mmobWP_041363127.1 HU family DNA-binding protein [Mycoplasma mobile]331.1e-04
mgalWP_011113373.1 HU family DNA-binding protein [Mycoplasma gallisepticum]563.9e-13
uureWP_004026158.1 HU family DNA-binding protein [Ureaplasma urealyticum]408.7e-07
phytWP_011160617.1 MULTISPECIES: HU family DNA-binding protein [Candidatus Phytoplasma asteris]271.5e-02
bsubNP_390160.1 non-specific DNA-binding protein HBsu [Bacillus subtilis subsp. subtilis str. 168]262.3e-01
caceWP_010965549.1 MULTISPECIES: glycosyltransferase family 39 protein [Clostridium]251.5e+00
ecoliNP_416227.1 integration host factor subunit alpha [Escherichia coli str. K-12 substr. MG1655]343.4e-04

*mpne, Mycoplasma pneumoniae; mmob, Mycoplasma mobile; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Bac_DNA_binding1Bacterial DNA-binding protein19-10764.48.4e-18

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_044891219.1| HU family DNA-binding protein [Mycoplasma penetrans]119/119 (100%)6002.5e-78
ref|WP_004024862.1| HU family DNA-binding protein [Mycoplasma iowae]63/110 (57%)3154.2e-35
ref|WP_004024863.1| HU family DNA-binding protein [Mycoplasma iowae]63/110 (57%)3131.1e-34
ref|WP_052663396.1| HU family DNA-binding protein [Mycoplasma testudinis]33/92 (35%)1392.1e-08
ref|WP_027333231.1| HU family DNA-binding protein [Mycoplasma gallisepticum]33/98 (33%)1358.1e-08
ref|WP_011113373.1| HU family DNA-binding protein [Mycoplasma gallisepticum]33/98 (33%)1358.4e-08
ref|WP_011883877.1| HU family DNA-binding protein [Mycoplasma gallisepticum]33/99 (33%)1359.1e-08
ref|WP_151059581.1| HU family DNA-binding protein [Mycoplasma gallisepticum]33/99 (33%)1359.4e-08
ref|WP_065165445.1| HU family DNA-binding protein [Mycoplasma gallisepticum]33/99 (33%)1359.8e-08
ref|WP_027122365.1| HU family DNA-binding protein [Mycoplasma imitans]33/98 (33%)1271.4e-06

Maintained by Jun Ishikawa