General features
| Gene ID | MPN249
|
| Type | CDS
|
| From | 300255
|
| To | 301091
|
| Strand | +
|
| General name | yjeQ
|
| Definition | conserved hypothetical protein
|
| nt length | 837
|
| aa length | 278
|
| m.w. | 31549.40
|
| COG | [R] General function prediction only
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9050 ribosme small subunit-dependent GTPase A 1216449:1215586 | 143 | 1.2e-42
|
| mgen | WP_010869335.1 ribosome small subunit-dependent GTPase A [Mycoplasma genitalium] | 345 | 2.7e-122
|
| mpul | WP_010925485.1 ribosome small subunit-dependent GTPase A [Mycoplasma pulmonis] | 113 | 1.4e-31
|
| mmob | WP_041362975.1 ribosome small subunit-dependent GTPase A [Mycoplasma mobile] | 141 | 3.1e-42
|
| mmyc | NP_975305.1 hypothetical protein MSC_0306 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 112 | 1.1e-30
|
| mgal | WP_011113897.1 ribosome small subunit-dependent GTPase A [Mycoplasma gallisepticum] | 144 | 3.3e-43
|
| uure | WP_004025802.1 ribosome small subunit-dependent GTPase A [Ureaplasma urealyticum] | 147 | 1.9e-44
|
| phyt | WP_011160557.1 MULTISPECIES: ribosome small subunit-dependent GTPase [Candidatus Phytoplasma asteris] | 89 | 1.5e-22
|
| bsub | NP_389460.1 GTPase involved in ribosome biogenesis [Bacillus subtilis subsp. subtilis str. 168] | 117 | 3.5e-32
|
| cace | WP_010965036.1 ribosome small subunit-dependent GTPase A [Clostridium acetobutylicum] | 116 | 5.1e-32
|
| ecoli | NP_418585.4 ribosome small subunit-dependent GTPase A [Escherichia coli str. K-12 substr. MG1655] | 94 | 2.3e-23
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| RsgA_GTPase | 1 | RsgA GTPase | 58-220 | 156.5 | 5.4e-46
|
| MMR_HSR1 | 1 | 50S ribosome-binding GTPase | 159-215 | 26.4 | 5.6e-06
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874606.1| ribosome small subunit-dependent GTPase A [Mycoplasma pneumoniae] | 277/278 (99%) | 1463 | 0.0e+00
|
| ref|WP_058157861.1| ribosome small subunit-dependent GTPase A [Mycoplasma pneumoniae] | 276/278 (99%) | 1459 | 0.0e+00
|
| ref|WP_010869335.1| ribosome small subunit-dependent GTPase A [Mycoplasma genitalium] | 162/272 (59%) | 885 | 9.0e-117
|
| ref|WP_014894570.1| ribosome small subunit-dependent GTPase A [Mycoplasma genitalium] | 161/272 (59%) | 879 | 8.5e-116
|
| ref|WP_036499066.1| ribosome small subunit-dependent GTPase A, partial [Mycoplasma testudi... | 98/271 (36%) | 396 | 7.5e-43
|
| ref|WP_159640241.1| MULTISPECIES: ribosome small subunit-dependent GTPase A [unclassified ... | 96/262 (36%) | 386 | 3.1e-41
|
| ref|WP_159741351.1| MULTISPECIES: ribosome small subunit-dependent GTPase A [unclassified ... | 96/262 (36%) | 383 | 6.7e-41
|
| ref|WP_125164373.1| MULTISPECIES: ribosome small subunit-dependent GTPase A [Erysipelothri... | 95/273 (34%) | 382 | 1.2e-40
|
| ref|WP_159638730.1| ribosome small subunit-dependent GTPase A [Erysipelothrix sp. D16_1577... | 95/262 (36%) | 381 | 1.4e-40
|
| ref|WP_031488940.1| ribosome small subunit-dependent GTPase A [Ureaplasma canigenitalium] | 88/262 (33%) | 381 | 1.6e-40
|
Maintained by Jun Ishikawa