General features

Gene IDMYPE2470
TypeCDS
From304156
To305961
Strand+
General name
DefinitionABC transporter ATP-binding protein, paralog family
nt length1806
aa length601
m.w.67553.92
COG[Q] Secondary metabolites biosynthesis, transport and catabolism

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN018 pmd1 transport ATP-binding protein 19325:211962313.5e-69
phytWP_011160434.1 MULTISPECIES: ABC transporter ATP-binding protein [Candidatus Phytoplasma asteris]2801.8e-88
bsubNP_388702.1 putative xenobiotic ABC transporter subunit (ATP-binding protein) [Bacillus subtilis subsp. subtilis str. 168]3401.9e-110
caceWP_010966684.1 MULTISPECIES: ABC transporter ATP-binding protein [Clostridium]6050.0e+00
ecoliNP_415434.1 ATP-binding lipopolysaccharide transport protein [Escherichia coli str. K-12 substr. MG1655]2221.6e-65

*mpne, Mycoplasma pneumoniae; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region26-277134.74.7e-39

ABC_tran1ABC transporter369-518113.11.3e-32

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_044891218.1| ABC transporter ATP-binding protein [Mycoplasma penetrans]595/595 (100%)30850.0e+00
ref|WP_129374620.1| ABC transporter ATP-binding protein [Mycoplasma penetrans]594/595 (99%)30790.0e+00
ref|WP_129223185.1| ABC transporter ATP-binding protein [Candidatus Borkfalkia ceftriaxoni...342/583 (58%)18260.0e+00
ref|WP_118300989.1| ABC transporter ATP-binding protein [Clostridium sp. AM22-11AC]337/587 (57%)17950.0e+00
ref|WP_119987710.1| MULTISPECIES: ABC transporter ATP-binding protein [unclassified Coproc...336/582 (57%)17930.0e+00
ref|WP_087154195.1| ABC transporter ATP-binding protein [Lachnoclostridium sp. An196]333/587 (56%)17890.0e+00
ref|WP_122641763.1| ABC transporter ATP-binding protein [Clostridiales bacterium Marseille...338/587 (57%)17880.0e+00
ref|WP_008974896.1| MULTISPECIES: ABC transporter ATP-binding protein [unclassified Coproc...336/582 (57%)17880.0e+00
ref|WP_016438337.1| ABC transporter ATP-binding protein [Coprococcus sp. HPP0074]336/582 (57%)17880.0e+00
ref|WP_117576603.1| ABC transporter ATP-binding protein [Lachnospiraceae bacterium AM25-17...335/582 (57%)17850.0e+00

Maintained by Jun Ishikawa