General features
| Gene ID | MPN245
|
| Type | CDS
|
| From | 297788
|
| To | 297138
|
| Strand | -
|
| General name | def
|
| Definition | polypeptide deformylase
|
| nt length | 651
|
| aa length | 216
|
| m.w. | 24591.55
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE5650 def polypeptide deformylase 719197:719757 | 175 | 3.9e-57
|
| mgen | WP_009885664.1 peptide deformylase [Mycoplasma genitalium] | 290 | 8.3e-103
|
| mpul | WP_083801835.1 peptide deformylase [Mycoplasma pulmonis] | 85 | 2.4e-22
|
| mmob | WP_041362993.1 peptide deformylase [Mycoplasma mobile] | 106 | 1.6e-30
|
| mmyc | NP_975221.1 peptide deformylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 114 | 2.3e-33
|
| mgal | WP_011113901.1 peptide deformylase [Mycoplasma gallisepticum] | 206 | 2.2e-69
|
| uure | WP_012560199.1 peptide deformylase [Ureaplasma urealyticum] | 142 | 3.6e-44
|
| bsub | NP_389339.1 N-formyl-cysteine deformylase (promiscuous) [Bacillus subtilis subsp. subtilis str. 168] | 113 | 1.5e-32
|
| cace | WP_010965029.1 MULTISPECIES: peptide deformylase [Clostridium] | 64 | 3.7e-14
|
| ecoli | NP_417745.1 peptide deformylase [Escherichia coli str. K-12 substr. MG1655] | 70 | 4.9e-16
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Pep_deformylase | 1 | Polypeptide deformylase | 33-196 | 133.3 | 5.5e-39
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874602.1| peptide deformylase [Mycoplasma pneumoniae] | 216/216 (100%) | 1156 | 4.8e-160
|
| ref|WP_017532803.1| peptide deformylase [Mycoplasma pneumoniae] | 153/153 (100%) | 832 | 1.2e-111
|
| ref|WP_081000867.1| peptide deformylase [Mycoplasma pneumoniae] | 152/153 (99%) | 824 | 2.7e-110
|
| ref|WP_009885664.1| peptide deformylase [Mycoplasma genitalium] | 135/192 (70%) | 742 | 2.8e-97
|
| ref|WP_027124188.1| peptide deformylase [Mycoplasma pirum] | 105/184 (57%) | 573 | 1.4e-71
|
| ref|WP_052663486.1| peptide deformylase [Mycoplasma testudinis] | 104/192 (54%) | 541 | 1.2e-66
|
| ref|WP_014574768.1| peptide deformylase [Mycoplasma gallisepticum] | 100/184 (54%) | 526 | 2.2e-64
|
| ref|WP_027333290.1| peptide deformylase [Mycoplasma gallisepticum] | 99/184 (53%) | 524 | 4.4e-64
|
| ref|WP_011113901.1| peptide deformylase [Mycoplasma gallisepticum] | 100/184 (54%) | 524 | 4.7e-64
|
| ref|WP_014886246.1| peptide deformylase [Mycoplasma gallisepticum] | 100/184 (54%) | 523 | 5.7e-64
|
Maintained by Jun Ishikawa