General features
| Gene ID | MPN241
|
| Type | CDS
|
| From | 293265
|
| To | 294107
|
| Strand | +
|
| General name |
|
| Definition | conserved hypothetical protein
|
| nt length | 843
|
| aa length | 280
|
| m.w. | 32193.65
|
| COG | [S] Function unknown
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE1810 conserved hypothetical protein 228442:227540 | 104 | 1.2e-27
|
| mgen | WP_010869332.1 DNA-binding protein WhiA [Mycoplasma genitalium] | 321 | 8.5e-113
|
| mpul | WP_041363985.1 DNA-binding protein WhiA [Mycoplasma pulmonis] | 74 | 4.1e-17
|
| mmob | WP_011264964.1 DNA-binding protein WhiA [Mycoplasma mobile] | 74 | 3.0e-17
|
| mmyc | NP_975902.1 hypothetical protein MSC_0935 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 63 | 2.5e-13
|
| mgal | WP_011113709.1 DNA-binding protein WhiA [Mycoplasma gallisepticum] | 92 | 1.7e-23
|
| uure | WP_004027130.1 DNA-binding protein WhiA [Ureaplasma urealyticum] | 112 | 1.5e-30
|
| phyt | WP_041624757.1 DNA-binding protein WhiA [Onion yellows phytoplasma] | 69 | 3.1e-15
|
| bsub | NP_391355.1 putative morphogen [Bacillus subtilis subsp. subtilis str. 168] | 63 | 1.2e-12
|
| cace | WP_010963835.1 MULTISPECIES: DNA-binding protein WhiA [Clostridium] | 77 | 2.3e-17
|
| ecoli | NP_415222.1 DNA-binding transcriptional activator KdpE [Escherichia coli str. K-12 substr. MG1655] | 28 | 4.7e-01
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| HTH_WhiA | 1 | WhiA C-terminal HTH domain | 193-277 | 60.2 | 1.8e-16
|
| LAGLIDADG_WhiA | 1 | WhiA LAGLIDADG-like domain | 98-186 | 58.6 | 5e-16
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874598.1| DNA-binding protein WhiA [Mycoplasma pneumoniae] | 280/280 (100%) | 1466 | 0.0e+00
|
| ref|WP_084254055.1| DNA-binding protein WhiA [Mycoplasma pneumoniae] | 279/280 (99%) | 1458 | 0.0e+00
|
| ref|WP_054175769.1| DNA-binding protein WhiA [Mycoplasma pneumoniae] | 276/276 (100%) | 1445 | 0.0e+00
|
| ref|WP_010869332.1| DNA-binding protein WhiA [Mycoplasma genitalium] | 158/279 (56%) | 823 | 2.9e-107
|
| ref|WP_066191817.1| DNA-binding protein WhiA, partial [Bacteroidales bacterium Barb6] | 64/199 (32%) | 294 | 5.7e-28
|
| ref|WP_004024887.1| DNA-binding protein WhiA [Mycoplasma iowae] | 79/277 (28%) | 286 | 2.4e-26
|
| ref|WP_134169120.1| DNA-binding protein WhiA [Breznakia blatticola] | 63/182 (34%) | 283 | 6.7e-26
|
| ref|WP_004027130.1| DNA-binding protein WhiA [Ureaplasma urealyticum] | 81/276 (29%) | 279 | 3.5e-25
|
| ref|WP_004025645.1| DNA-binding protein WhiA [Ureaplasma urealyticum] | 81/276 (29%) | 279 | 3.5e-25
|
| ref|WP_102268142.1| DNA-binding protein WhiA [Massilicoli timonensis] | 58/179 (32%) | 276 | 7.1e-25
|
Maintained by Jun Ishikawa