General features

Gene IDMPN236
TypeCDS
From287388
To288827
Strand+
General name
DefinitionGlu-tRNA amidotransferase subunit C
nt length1440
aa length479
m.w.54160.12
COG[J] Translation, ribosomal structure and biogenesis

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mypeMYPE2080 glutamyl-tRNA amidotransferase subunit C-related protein 261398:262471894.9e-21
mgenWP_009885655.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma genitalium]6870.0e+00
mpulWP_010925059.1 hypothetical protein [Mycoplasma pulmonis]472.4e-07
mmobWP_011264676.1 hypothetical protein [Mycoplasma mobile]381.4e-04
mmycNP_975739.1 glutamyl-tRNA(Gln) amidotransferase subunit C [Mycoplasma mycoides subsp. mycoides SC str. PG1]412.9e-06
mgalWP_011113867.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma gallisepticum]2435.8e-77
uureWP_004025595.1 membrane protein [Ureaplasma urealyticum]1352.3e-37
caceWP_010966261.1 MULTISPECIES: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Clostridium]363.8e-04
ecoliNP_416881.1 sensory histidine kinase YpdA [Escherichia coli str. K-12 substr. MG1655]333.4e-02

*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result:



ModelNo.Descrip tionPosition (aa)ScoreE-value

Glu-tRNAGln1Glu-tRNAGln amidotransferase C subunit407-47949.44.1e-13

BLAST search result (top 10 hits)

ID DescriptionIdentityScoreE-value
ref|WP_010874593.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...479/479 (100%)24830.0e+00
ref|WP_054173805.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...478/479 (99%)24780.0e+00
ref|WP_017532948.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...478/479 (99%)24760.0e+00
ref|WP_084976083.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...478/479 (99%)24760.0e+00
ref|WP_038534381.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...477/479 (99%)24720.0e+00
ref|WP_159203426.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...477/479 (99%)24700.0e+00
ref|WP_054173248.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...477/479 (99%)24700.0e+00
ref|WP_014325414.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...477/479 (99%)24680.0e+00
ref|WP_054175770.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...477/479 (99%)24660.0e+00
ref|WP_086127245.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [Mycoplasma ...476/479 (99%)24640.0e+00

Maintained by Jun Ishikawa