General features
| Gene ID | MPN232
|
| Type | CDS
|
| From | 281673
|
| To | 283094
|
| Strand | +
|
| General name | dnaB
|
| Definition | replicative DNA helicase DnaB
|
| nt length | 1422
|
| aa length | 473
|
| m.w. | 54489.72
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE2050 dnaB replicative DNA helicase 257827:259260 | 209 | 2.1e-63
|
| mgen | WP_010869329.1 AAA family ATPase [Mycoplasma genitalium] | 634 | 0.0e+00
|
| mpul | WP_050780377.1 replicative DNA helicase [Mycoplasma pulmonis] | 152 | 8.2e-43
|
| mmob | WP_011264691.1 replicative DNA helicase [Mycoplasma mobile] | 166 | 4.8e-48
|
| mmyc | NP_975923.1 replicative DNA helicase DnaC [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 179 | 5.8e-53
|
| mgal | WP_011113870.1 AAA family ATPase [Mycoplasma gallisepticum] | 185 | 4.6e-54
|
| uure | WP_004026202.1 AAA family ATPase [Ureaplasma urealyticum] | 191 | 7.2e-57
|
| phyt | WP_011160388.1 replicative DNA helicase [Onion yellows phytoplasma] | 164 | 1.9e-47
|
| bsub | NP_391924.2 replicative DNA helicase [Bacillus subtilis subsp. subtilis str. 168] | 180 | 1.6e-52
|
| cace | WP_010966975.1 MULTISPECIES: replicative DNA helicase [Clostridium] | 184 | 4.3e-54
|
| ecoli | NP_418476.1 replicative DNA helicase [Escherichia coli str. K-12 substr. MG1655] | 170 | 2.2e-48
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| DnaB_C | 1 | DnaB-like helicase C terminal domain | 197-463 | 265.1 | 5.3e-79
|
| AAA_25 | 1 | AAA domain | 193-381 | 44.8 | 1e-11
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874589.1| AAA family ATPase [Mycoplasma pneumoniae] | 473/473 (100%) | 2464 | 0.0e+00
|
| ref|WP_014325412.1| AAA family ATPase [Mycoplasma pneumoniae] | 471/473 (99%) | 2445 | 0.0e+00
|
| ref|WP_159204635.1| AAA family ATPase [Mycoplasma pneumoniae] | 470/473 (99%) | 2440 | 0.0e+00
|
| ref|WP_159203632.1| AAA family ATPase [Mycoplasma pneumoniae] | 470/473 (99%) | 2436 | 0.0e+00
|
| ref|WP_017532949.1| AAA family ATPase [Mycoplasma pneumoniae] | 470/473 (99%) | 2433 | 0.0e+00
|
| ref|WP_161609628.1| AAA family ATPase [Mycoplasma pneumoniae] | 469/473 (99%) | 2429 | 0.0e+00
|
| ref|WP_010869329.1| AAA family ATPase [Mycoplasma genitalium] | 319/467 (68%) | 1636 | 0.0e+00
|
| ref|WP_014893929.1| AAA family ATPase [Mycoplasma genitalium] | 319/467 (68%) | 1635 | 0.0e+00
|
| ref|WP_014894388.1| AAA family ATPase [Mycoplasma genitalium] | 318/467 (68%) | 1632 | 0.0e+00
|
| ref|WP_027123902.1| replicative DNA helicase [Mycoplasma pirum] | 168/445 (37%) | 629 | 7.6e-73
|
Maintained by Jun Ishikawa