General features
| Gene ID | MPN220
|
| Type | CDS
|
| From | 272462
|
| To | 273142
|
| Strand | +
|
| General name | rplA
|
| Definition | ribosomal protein L1
|
| nt length | 681
|
| aa length | 226
|
| m.w. | 24354.34
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE260 ribosomal protein L1 36106:37116 | 211 | 2.7e-69
|
| mgen | WP_010869323.1 50S ribosomal protein L1 [Mycoplasma genitalium] | 374 | 3.0e-135
|
| mpul | WP_010924814.1 50S ribosomal protein L1 [Mycoplasma pulmonis] | 224 | 6.0e-76
|
| mmob | WP_011264659.1 50S ribosomal protein L1 [Mycoplasma mobile] | 215 | 1.8e-72
|
| mmyc | NP_975962.1 50S ribosomal protein L1 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 233 | 1.6e-79
|
| mgal | WP_011113926.1 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 296 | 2.9e-104
|
| uure | WP_004025539.1 50S ribosomal protein L1 [Ureaplasma urealyticum] | 245 | 2.5e-84
|
| phyt | WP_034172138.1 MULTISPECIES: 50S ribosomal protein L1 [Candidatus Phytoplasma asteris] | 193 | 8.5e-64
|
| bsub | NP_387984.2 ribosomal protein L1 (BL1) [Bacillus subtilis subsp. subtilis str. 168] | 207 | 8.2e-69
|
| cace | WP_010966424.1 MULTISPECIES: 50S ribosomal protein L1 [Clostridium] | 177 | 1.0e-56
|
| ecoli | NP_418411.1 50S ribosomal subunit protein L1 [Escherichia coli str. K-12 substr. MG1655] | 178 | 5.6e-57
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L1 | 1 | Ribosomal protein L1p/L10e family | 31-218 | 142.9 | 1.1e-41
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874577.1| 50S ribosomal protein L1 [Mycoplasma pneumoniae] | 226/226 (100%) | 1157 | 7.8e-160
|
| ref|WP_010869323.1| 50S ribosomal protein L1 [Mycoplasma genitalium] | 181/226 (80%) | 960 | 1.0e-129
|
| ref|WP_027123761.1| 50S ribosomal protein L1 [Mycoplasma pirum] | 147/219 (67%) | 794 | 1.6e-104
|
| ref|WP_027333328.1| 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 136/212 (64%) | 758 | 5.6e-99
|
| ref|WP_011113926.1| 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 136/212 (64%) | 757 | 6.3e-99
|
| ref|WP_065164866.1| 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 135/212 (63%) | 755 | 1.4e-98
|
| ref|WP_027122232.1| 50S ribosomal protein L1 [Mycoplasma imitans] | 134/209 (64%) | 754 | 1.8e-98
|
| ref|WP_011883459.1| 50S ribosomal protein L1 [Mycoplasma gallisepticum] | 136/212 (64%) | 754 | 2.1e-98
|
| ref|WP_033159953.1| 50S ribosomal protein L1 [Mycoplasma alvi] | 149/219 (68%) | 744 | 6.2e-97
|
| ref|WP_027119591.1| 50S ribosomal protein L1 [Mycoplasma testudinis] | 143/219 (65%) | 729 | 1.2e-94
|
Maintained by Jun Ishikawa