General features
| Gene ID | MPN215
|
| Type | CDS
|
| From | 265910
|
| To | 267079
|
| Strand | +
|
| General name | oppB
|
| Definition | oligopeptide transport system permease protein OppB
|
| nt length | 1170
|
| aa length | 389
|
| m.w. | 43537.74
|
| COG | [EP]
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE8780 oppB oligopeptide ABC transporter permease protein 1183321:1182077 | 284 | 3.7e-94
|
| mgen | WP_009885932.1 ABC transporter permease [Mycoplasma genitalium] | 598 | 0.0e+00
|
| mpul | WP_010925087.1 ABC transporter permease [Mycoplasma pulmonis] | 148 | 7.2e-43
|
| mmob | WP_011264971.1 ABC transporter permease [Mycoplasma mobile] | 149 | 3.0e-43
|
| mmyc | NP_975932.1 oligopeptide ABC transporter permease [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 108 | 5.1e-28
|
| mgal | WP_011113772.1 ABC transporter permease [Mycoplasma gallisepticum] | 104 | 1.3e-26
|
| uure | WP_004027117.1 ABC transporter permease [Ureaplasma urealyticum] | 105 | 5.1e-27
|
| phyt | WP_011160565.1 MULTISPECIES: ABC transporter permease [Candidatus Phytoplasma asteris] | 93 | 3.5e-23
|
| bsub | NP_389026.1 oligopeptide ABC transporter (permease) [Bacillus subtilis subsp. subtilis str. 168] | 123 | 2.8e-33
|
| cace | WP_010966894.1 MULTISPECIES: ABC transporter permease [Clostridium] | 129 | 2.4e-35
|
| ecoli | NP_415760.1 murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB [Escherichia coli str. K-12 substr. MG1655] | 110 | 1.3e-28
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 97-296 | 91.9 | 3.8e-26
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874572.1| ABC transporter permease [Mycoplasma pneumoniae] | 389/389 (100%) | 2010 | 0.0e+00
|
| ref|WP_009885932.1| ABC transporter permease [Mycoplasma genitalium] | 298/385 (77%) | 1543 | 0.0e+00
|
| ref|WP_014894140.1| ABC transporter permease [Mycoplasma genitalium] | 297/385 (77%) | 1542 | 0.0e+00
|
| ref|WP_027124193.1| ABC transporter permease [Mycoplasma pirum] | 151/384 (39%) | 779 | 4.8e-97
|
| ref|WP_084269093.1| ABC transporter permease [Mycoplasma alvi] | 143/379 (37%) | 754 | 2.4e-93
|
| ref|WP_011077698.1| ABC transporter permease [Mycoplasma penetrans] | 149/388 (38%) | 726 | 5.6e-89
|
| ref|WP_129374421.1| ABC transporter permease [Mycoplasma penetrans] | 149/388 (38%) | 725 | 7.8e-89
|
| ref|WP_027122047.1| ABC transporter permease [Mycoplasma imitans] | 134/331 (40%) | 578 | 4.5e-67
|
| ref|WP_011884734.1| ABC transporter permease [Mycoplasma gallisepticum] | 131/313 (41%) | 562 | 1.0e-64
|
| ref|WP_151029892.1| ABC transporter permease subunit [Mycoplasma gallisepticum] | 131/313 (41%) | 559 | 3.3e-64
|
Maintained by Jun Ishikawa