General features
| Gene ID | MPN211
|
| Type | CDS
|
| From | 259641
|
| To | 261614
|
| Strand | +
|
| General name | uvrB
|
| Definition | excinuclease ABC subunit B
|
| nt length | 1974
|
| aa length | 657
|
| m.w. | 75192.70
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE8890 uvrB excinuclease ABC subunit B 1196921:1194933 | 661 | 0.0e+00
|
| mgen | WP_010869318.1 excinuclease ABC subunit B [Mycoplasma genitalium] | 1064 | 0.0e+00
|
| mpul | WP_010924900.1 excinuclease ABC subunit UvrB [Mycoplasma pulmonis] | 571 | 0.0e+00
|
| mmob | WP_011265092.1 excinuclease ABC subunit UvrB [Mycoplasma mobile] | 556 | 0.0e+00
|
| mmyc | NP_975911.1 excinuclease ABC subunit B [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 608 | 0.0e+00
|
| mgal | WP_080512214.1 excinuclease ABC subunit UvrB [Mycoplasma gallisepticum] | 719 | 0.0e+00
|
| uure | WP_012560222.1 excinuclease ABC subunit UvrB [Ureaplasma urealyticum] | 681 | 0.0e+00
|
| phyt | WP_011160782.1 excinuclease ABC subunit B [Onion yellows phytoplasma] | 615 | 0.0e+00
|
| bsub | NP_391397.1 excinuclease ABC (subunit B) [Bacillus subtilis subsp. subtilis str. 168] | 618 | 0.0e+00
|
| cace | WP_010963824.1 MULTISPECIES: excinuclease ABC subunit UvrB [Clostridium] | 571 | 0.0e+00
|
| ecoli | NP_415300.1 excision nuclease subunit B [Escherichia coli str. K-12 substr. MG1655] | 569 | 0.0e+00
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| UvrB_inter | 1 | UvrB interaction domain | 164-252 | 79.6 | 1.4e-22
|
| Helicase_C | 1 | Helicase conserved C-terminal domain | 440-548 | 74.6 | 7.1e-21
|
| UvrB | 1 | Ultra-violet resistance protein B | 556-597 | 62.6 | 2.3e-17
|
| UVR | 1 | UvrB/uvrC motif | 617-650 | 39.5 | 3.1e-10
|
| ResIII | 1 | Type III restriction enzyme, res subunit | 23-141 | 37.9 | 1.7e-09
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874568.1| excinuclease ABC subunit B [Mycoplasma pneumoniae] | 657/657 (100%) | 3500 | 0.0e+00
|
| ref|WP_058157860.1| excinuclease ABC subunit B [Mycoplasma pneumoniae] | 656/657 (99%) | 3496 | 0.0e+00
|
| ref|WP_161609747.1| excinuclease ABC subunit B [Mycoplasma pneumoniae] | 656/657 (99%) | 3494 | 0.0e+00
|
| ref|WP_159203241.1| excinuclease ABC subunit B [Mycoplasma pneumoniae] | 656/657 (99%) | 3493 | 0.0e+00
|
| ref|WP_161611428.1| excinuclease ABC subunit B [Mycoplasma pneumoniae] | 656/657 (99%) | 3493 | 0.0e+00
|
| ref|WP_161609382.1| excinuclease ABC subunit B [Mycoplasma pneumoniae] | 656/657 (99%) | 3491 | 0.0e+00
|
| ref|WP_010869318.1| excinuclease ABC subunit B [Mycoplasma genitalium] | 505/656 (76%) | 2752 | 0.0e+00
|
| ref|WP_014893921.1| excinuclease ABC subunit B [Mycoplasma genitalium] | 504/656 (76%) | 2746 | 0.0e+00
|
| ref|WP_014894382.1| excinuclease ABC subunit B [Mycoplasma genitalium] | 503/656 (76%) | 2745 | 0.0e+00
|
| ref|WP_014894561.1| excinuclease ABC subunit B [Mycoplasma genitalium] | 503/656 (76%) | 2745 | 0.0e+00
|
Maintained by Jun Ishikawa