General features
| Gene ID | MPN208
|
| Type | CDS
|
| From | 253758
|
| To | 254642
|
| Strand | +
|
| General name | rpsB
|
| Definition | ribosomal protein S2
|
| nt length | 885
|
| aa length | 294
|
| m.w. | 33425.42
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9660 rpsB ribosomal protein S2 1287464:1286361 | 208 | 1.2e-66
|
| mgen | WP_009885926.1 30S ribosomal protein S2 [Mycoplasma genitalium] | 466 | 1.3e-169
|
| mpul | WP_010925334.1 30S ribosomal protein S2 [Mycoplasma pulmonis] | 154 | 3.4e-46
|
| mmob | WP_011264696.1 30S ribosomal protein S2 [Mycoplasma mobile] | 153 | 1.5e-46
|
| mmyc | NP_975588.1 30S ribosomal protein S2 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 58 | 3.5e-12
|
| mgal | WP_011113775.1 30S ribosomal protein S2 [Mycoplasma gallisepticum] | 241 | 3.5e-80
|
| uure | WP_004026326.1 30S ribosomal protein S2 [Ureaplasma urealyticum] | 218 | 1.1e-70
|
| phyt | WP_011160540.1 MULTISPECIES: 30S ribosomal protein S2 [Candidatus Phytoplasma asteris] | 144 | 2.8e-43
|
| bsub | NP_389531.1 ribosomal protein S2 [Bacillus subtilis subsp. subtilis str. 168] | 179 | 2.7e-56
|
| cace | WP_010965093.1 MULTISPECIES: 30S ribosomal protein S2 [Clostridium] | 154 | 7.1e-47
|
| ecoli | NP_414711.1 30S ribosomal subunit protein S2 [Escherichia coli str. K-12 substr. MG1655] | 152 | 3.5e-46
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S2 | 1 | Ribosomal protein S2 | 25-239 | 228.4 | 5.5e-68
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874565.1| 30S ribosomal protein S2 [Mycoplasma pneumoniae] | 294/294 (100%) | 1554 | 0.0e+00
|
| ref|WP_161609381.1| 30S ribosomal protein S2 [Mycoplasma pneumoniae] | 293/294 (99%) | 1550 | 0.0e+00
|
| ref|WP_159202584.1| 30S ribosomal protein S2 [Mycoplasma pneumoniae] | 293/294 (99%) | 1546 | 0.0e+00
|
| ref|WP_014325403.1| 30S ribosomal protein S2 [Mycoplasma pneumoniae] | 292/294 (99%) | 1540 | 0.0e+00
|
| ref|WP_009885926.1| 30S ribosomal protein S2 [Mycoplasma genitalium] | 223/275 (81%) | 1199 | 4.4e-164
|
| ref|WP_014894558.1| 30S ribosomal protein S2 [Mycoplasma genitalium] | 222/275 (80%) | 1196 | 1.3e-163
|
| ref|WP_014893918.1| 30S ribosomal protein S2 [Mycoplasma genitalium] | 222/275 (80%) | 1190 | 9.3e-163
|
| ref|WP_014894136.1| 30S ribosomal protein S2 [Mycoplasma genitalium] | 222/275 (80%) | 1189 | 1.5e-162
|
| ref|WP_159202183.1| 30S ribosomal protein S2, partial [Mycoplasma pneumoniae] | 198/201 (98%) | 1023 | 1.4e-138
|
| ref|WP_159202196.1| 30S ribosomal protein S2, partial [Mycoplasma pneumoniae] | 135/136 (99%) | 718 | 3.2e-93
|
Maintained by Jun Ishikawa