General features
| Gene ID | MYPE2050
|
| Type | CDS
|
| From | 257827
|
| To | 259260
|
| Strand | +
|
| General name | dnaB
|
| Definition | replicative DNA helicase
|
| nt length | 1434
|
| aa length | 477
|
| m.w. | 54954.93
|
| COG | [L] Replication, recombination and repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN232 dnaB replicative DNA helicase DnaB 281673:283094 | 206 | 7.4e-63
|
| mgen | WP_010869329.1 AAA family ATPase [Mycoplasma genitalium] | 232 | 8.7e-73
|
| mpul | WP_050780377.1 replicative DNA helicase [Mycoplasma pulmonis] | 199 | 3.2e-60
|
| mmob | WP_011264691.1 replicative DNA helicase [Mycoplasma mobile] | 181 | 2.1e-53
|
| mmyc | NP_975923.1 replicative DNA helicase DnaC [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 212 | 4.0e-65
|
| mgal | WP_011113870.1 AAA family ATPase [Mycoplasma gallisepticum] | 188 | 3.6e-55
|
| uure | WP_004026202.1 AAA family ATPase [Ureaplasma urealyticum] | 248 | 1.7e-78
|
| phyt | WP_011160388.1 replicative DNA helicase [Onion yellows phytoplasma] | 210 | 1.0e-64
|
| bsub | NP_391924.2 replicative DNA helicase [Bacillus subtilis subsp. subtilis str. 168] | 226 | 7.4e-70
|
| cace | WP_010966975.1 MULTISPECIES: replicative DNA helicase [Clostridium] | 210 | 6.7e-64
|
| ecoli | NP_418476.1 replicative DNA helicase [Escherichia coli str. K-12 substr. MG1655] | 204 | 3.1e-61
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| DnaB_C | 1 | DnaB-like helicase C terminal domain | 190-470 | 263.3 | 1.9e-78
|
| DnaB | 1 | DnaB-like helicase N terminal domain | 15-116 | 76.6 | 1.3e-21
|
| AAA_25 | 1 | AAA domain | 195-382 | 56.8 | 2.2e-15
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077032.1| replicative DNA helicase [Mycoplasma penetrans] | 477/477 (100%) | 2478 | 0.0e+00
|
| ref|WP_129374601.1| replicative DNA helicase [Mycoplasma penetrans] | 476/477 (99%) | 2476 | 0.0e+00
|
| ref|WP_004025303.1| replicative DNA helicase [Mycoplasma iowae] | 219/456 (48%) | 1035 | 4.0e-133
|
| ref|WP_052663503.1| replicative DNA helicase [Mycoplasma testudinis] | 198/453 (43%) | 837 | 8.6e-104
|
| ref|WP_158420504.1| AAA family ATPase [Mycoplasma iowae] | 168/321 (52%) | 797 | 3.3e-99
|
| ref|WP_033160094.1| replicative DNA helicase [Mycoplasma alvi] | 182/457 (39%) | 792 | 4.5e-97
|
| ref|WP_027123902.1| replicative DNA helicase [Mycoplasma pirum] | 177/469 (37%) | 782 | 1.7e-95
|
| ref|WP_069642737.1| replicative DNA helicase [Desulfuribacillus alkaliarsenatis] | 165/474 (34%) | 695 | 9.4e-83
|
| ref|WP_139492481.1| replicative DNA helicase [Brevibacillus sp. CHY01] | 166/460 (36%) | 694 | 1.4e-82
|
| ref|WP_055745983.1| replicative DNA helicase [Brevibacillus choshinensis] | 166/458 (36%) | 691 | 3.4e-82
|
Maintained by Jun Ishikawa