General features
| Gene ID | MPN197
|
| Type | CDS
|
| From | 236529
|
| To | 238364
|
| Strand | +
|
| General name | pepF
|
| Definition | oligoendopeptidase F
|
| nt length | 1836
|
| aa length | 611
|
| m.w. | 70958.63
|
| COG | [E] Amino acid transport and metabolism
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE2820 pepF oligoendopeptidase F 369209:371023 | 369 | 1.3e-121
|
| mgen | WP_009885868.1 oligoendopeptidase F [Mycoplasma genitalium] | 828 | 0.0e+00
|
| mpul | WP_010925125.1 oligoendopeptidase F [Mycoplasma pulmonis] | 268 | 4.1e-83
|
| mmob | WP_011264719.1 oligoendopeptidase F [Mycoplasma mobile] | 273 | 2.8e-85
|
| mmyc | NP_975237.1 oligoendopeptidase F [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 129 | 6.4e-33
|
| mgal | WP_011113582.1 hypothetical protein [Mycoplasma gallisepticum] | 30 | 6.9e-02
|
| uure | WP_004026177.1 oligoendopeptidase F [Ureaplasma urealyticum] | 358 | 1.1e-117
|
| phyt | WP_011160553.1 M3 family oligoendopeptidase [Onion yellows phytoplasma] | 34 | 2.4e-03
|
| bsub | NP_389036.2 oligoendopeptidase F [Bacillus subtilis subsp. subtilis str. 168] | 173 | 3.3e-47
|
| cace | WP_010963484.1 MULTISPECIES: glutamine--fructose-6-phosphate transaminase (isomerizing) [Clostridium] | 29 | 5.6e-01
|
| ecoli | NP_417669.1 RNA polymerase, sigma 54 (sigma N) factor [Escherichia coli str. K-12 substr. MG1655] | 33 | 2.8e-02
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Peptidase_M3 | 1 | Peptidase family M3 | 194-590 | 256.4 | 6.9e-76
|
| Peptidase_M3_N | 1 | Oligopeptidase F | 111-171 | 52.7 | 3.9e-14
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874554.1| oligoendopeptidase F [Mycoplasma pneumoniae] | 611/611 (100%) | 3263 | 0.0e+00
|
| ref|WP_086132716.1| oligoendopeptidase F [Mycoplasma pneumoniae] | 610/611 (99%) | 3256 | 0.0e+00
|
| ref|WP_014325394.1| oligoendopeptidase F [Mycoplasma pneumoniae] | 610/611 (99%) | 3252 | 0.0e+00
|
| ref|WP_159203651.1| oligoendopeptidase F, partial [Mycoplasma pneumoniae] | 493/494 (99%) | 2631 | 0.0e+00
|
| ref|WP_009885868.1| oligoendopeptidase F [Mycoplasma genitalium] | 389/607 (64%) | 2140 | 0.0e+00
|
| ref|WP_014893975.1| oligoendopeptidase F [Mycoplasma genitalium] | 389/607 (64%) | 2138 | 0.0e+00
|
| ref|WP_014894607.1| oligoendopeptidase F [Mycoplasma genitalium] | 388/607 (63%) | 2131 | 0.0e+00
|
| ref|WP_033160011.1| oligoendopeptidase F [Mycoplasma alvi] | 242/607 (39%) | 1162 | 1.2e-148
|
| ref|WP_052663041.1| oligoendopeptidase F [Mycoplasma pirum] | 240/611 (39%) | 1151 | 7.0e-147
|
| ref|WP_052663514.1| oligoendopeptidase F [Mycoplasma testudinis] | 244/595 (41%) | 1149 | 1.4e-146
|
Maintained by Jun Ishikawa