General features
| Gene ID | MPN192
|
| Type | CDS
|
| From | 232434
|
| To | 232808
|
| Strand | +
|
| General name | rplQ
|
| Definition | ribosomal protein L17
|
| nt length | 375
|
| aa length | 124
|
| m.w. | 14244.61
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9910 rpsQ ribosomal protein L17 1315160:1314801 | 127 | 6.9e-41
|
| mgen | WP_010869362.1 50S ribosomal protein L17 [Mycoplasma genitalium] | 208 | 6.0e-73
|
| mpul | WP_010925361.1 50S ribosomal protein L17 [Mycoplasma pulmonis] | 82 | 4.6e-23
|
| mmob | WP_011264782.1 50S ribosomal protein L17 [Mycoplasma mobile] | 84 | 4.8e-24
|
| mmyc | NP_975696.1 50S ribosomal protein L17 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 88 | 1.7e-25
|
| mgal | WP_011113886.1 50S ribosomal protein L17 [Mycoplasma gallisepticum] | 144 | 3.3e-47
|
| uure | WP_004026179.1 MULTISPECIES: 50S ribosomal protein L17 [Ureaplasma] | 130 | 7.2e-42
|
| phyt | WP_011160603.1 MULTISPECIES: 50S ribosomal protein L17 [Candidatus Phytoplasma] | 76 | 5.8e-21
|
| bsub | NP_388025.1 ribosomal protein L17 (BL15) [Bacillus subtilis subsp. subtilis str. 168] | 87 | 1.3e-24
|
| cace | WP_010966384.1 MULTISPECIES: 50S ribosomal protein L17 [Clostridium] | 91 | 5.3e-26
|
| ecoli | NP_417753.1 50S ribosomal subunit protein L17 [Escherichia coli str. K-12 substr. MG1655] | 67 | 1.5e-16
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L17 | 1 | Ribosomal protein L17 | 18-118 | 105.9 | 1.6e-30
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874549.1| 50S ribosomal protein L17 [Mycoplasma pneumoniae] | 124/124 (100%) | 649 | 9.1e-86
|
| ref|WP_010869362.1| 50S ribosomal protein L17 [Mycoplasma genitalium] | 100/121 (82%) | 529 | 2.0e-67
|
| ref|WP_014894604.1| 50S ribosomal protein L17 [Mycoplasma genitalium] | 99/121 (81%) | 525 | 9.4e-67
|
| ref|WP_027121767.1| 50S ribosomal protein L17 [Mycoplasma imitans] | 72/120 (60%) | 371 | 6.3e-43
|
| ref|WP_065165097.1| 50S ribosomal protein L17 [Mycoplasma gallisepticum] | 72/120 (60%) | 370 | 1.1e-42
|
| ref|WP_011883399.1| 50S ribosomal protein L17 [Mycoplasma gallisepticum] | 72/120 (60%) | 369 | 1.2e-42
|
| ref|WP_011113886.1| 50S ribosomal protein L17 [Mycoplasma gallisepticum] | 71/120 (59%) | 364 | 7.2e-42
|
| ref|WP_014574764.1| 50S ribosomal protein L17 [Mycoplasma gallisepticum] | 71/120 (59%) | 361 | 2.0e-41
|
| ref|WP_027124195.1| 50S ribosomal protein L17 [Mycoplasma pirum] | 67/120 (55%) | 354 | 2.1e-40
|
| ref|WP_031489016.1| 50S ribosomal protein L17 [Ureaplasma canigenitalium] | 67/118 (56%) | 343 | 3.6e-39
|
Maintained by Jun Ishikawa