General features
| Gene ID | MPN190
|
| Type | CDS
|
| From | 231077
|
| To | 231442
|
| Strand | +
|
| General name | rpsK
|
| Definition | ribosomal protein S11
|
| nt length | 366
|
| aa length | 121
|
| m.w. | 12686.71
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9930 rpsK ribosomal protein S11 1316552:1316181 | 130 | 7.5e-42
|
| mgen | WP_009885861.1 30S ribosomal protein S11 [Mycoplasma genitalium] | 223 | 5.7e-79
|
| mpul | WP_010925363.1 30S ribosomal protein S11 [Mycoplasma pulmonis] | 123 | 4.7e-39
|
| mmob | WP_011264780.1 30S ribosomal protein S11 [Mycoplasma mobile] | 119 | 9.9e-38
|
| mmyc | NP_975698.1 30S ribosomal protein S11 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 119 | 1.2e-37
|
| mgal | WP_011113888.1 30S ribosomal protein S11 [Mycoplasma gallisepticum] | 145 | 7.4e-48
|
| uure | WP_004026006.1 MULTISPECIES: 30S ribosomal protein S11 [Ureaplasma] | 137 | 5.3e-45
|
| phyt | WP_011160601.1 MULTISPECIES: 30S ribosomal protein S11 [Candidatus Phytoplasma asteris] | 114 | 1.2e-35
|
| bsub | NP_388023.1 ribosomal protein S11 (BS11) [Bacillus subtilis subsp. subtilis str. 168] | 119 | 5.8e-37
|
| cace | WP_010966387.1 MULTISPECIES: 30S ribosomal protein S11 [Clostridium] | 118 | 1.3e-36
|
| ecoli | NP_417756.1 30S ribosomal subunit protein S11 [Escherichia coli str. K-12 substr. MG1655] | 125 | 2.0e-39
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S11 | 1 | Ribosomal protein S11 | 12-121 | 127.4 | 3e-37
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874547.1| 30S ribosomal protein S11 [Mycoplasma pneumoniae] | 121/121 (100%) | 623 | 8.0e-82
|
| ref|WP_053344036.1| 30S ribosomal protein S11 [Mycoplasma pneumoniae] | 120/121 (99%) | 620 | 2.2e-81
|
| ref|WP_009885861.1| 30S ribosomal protein S11 [Mycoplasma genitalium] | 106/121 (87%) | 568 | 1.9e-73
|
| ref|WP_027124197.1| 30S ribosomal protein S11 [Mycoplasma pirum] | 75/121 (61%) | 419 | 1.1e-50
|
| ref|WP_027120109.1| 30S ribosomal protein S11 [Mycoplasma testudinis] | 80/121 (66%) | 399 | 1.2e-47
|
| ref|WP_031489018.1| 30S ribosomal protein S11 [Ureaplasma canigenitalium] | 70/121 (57%) | 391 | 1.9e-46
|
| ref|WP_027121765.1| 30S ribosomal protein S11 [Mycoplasma imitans] | 72/121 (59%) | 368 | 6.6e-43
|
| ref|WP_151059826.1| 30S ribosomal protein S11 [Mycoplasma gallisepticum] | 71/121 (58%) | 366 | 1.3e-42
|
| ref|WP_011113888.1| 30S ribosomal protein S11 [Mycoplasma gallisepticum] | 71/121 (58%) | 365 | 1.6e-42
|
| ref|WP_033160196.1| 30S ribosomal protein S11 [Mycoplasma alvi] | 73/121 (60%) | 364 | 2.2e-42
|
Maintained by Jun Ishikawa