General features
| Gene ID | MPN187
|
| Type | CDS
|
| From | 230343
|
| To | 230579
|
| Strand | +
|
| General name | infA
|
| Definition | initiation factor 1
|
| nt length | 237
|
| aa length | 78
|
| m.w. | 9024.64
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE9950 infA translation initiation factor IF-1 1317311:1317093 | 80 | 1.3e-23
|
| mgen | WP_009885858.1 translation initiation factor IF-1 [Mycoplasma genitalium] | 121 | 5.3e-40
|
| mpul | WP_010925366.1 translation initiation factor IF-1 [Mycoplasma pulmonis] | 66 | 5.6e-18
|
| mmob | WP_011264777.1 translation initiation factor IF-1 [Mycoplasma mobile] | 65 | 1.5e-17
|
| mmyc | YP_003856775.1 translation initiation factor IF-1 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 71 | 6.4e-20
|
| mgal | WP_011113891.1 translation initiation factor IF-1 [Mycoplasma gallisepticum] | 90 | 1.4e-27
|
| uure | WP_004025652.1 translation initiation factor IF-1 [Ureaplasma urealyticum] | 78 | 4.5e-23
|
| phyt | WP_011160598.1 MULTISPECIES: translation initiation factor IF-1 [Candidatus Phytoplasma asteris] | 63 | 5.1e-17
|
| bsub | NP_388020.1 initiation factor IF-I [Bacillus subtilis subsp. subtilis str. 168] | 68 | 4.7e-18
|
| cace | WP_010966389.1 MULTISPECIES: translation initiation factor IF-1 [Clostridium] | 67 | 9.2e-18
|
| ecoli | NP_415404.1 translation initiation factor IF-1 [Escherichia coli str. K-12 substr. MG1655] | 70 | 7.5e-19
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| eIF-1a | 1 | Translation initiation factor 1A / IF-1 | 18-76 | 62.1 | 3.1e-17
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874544.1| translation initiation factor IF-1 [Mycoplasma pneumoniae] | 78/78 (100%) | 397 | 1.1e-48
|
| ref|WP_054173842.1| translation initiation factor IF-1 [Mycoplasma pneumoniae] | 77/78 (98%) | 392 | 5.6e-48
|
| ref|WP_009885858.1| translation initiation factor IF-1 [Mycoplasma genitalium] | 58/69 (84%) | 303 | 1.8e-34
|
| ref|WP_027121763.1| translation initiation factor IF-1 [Mycoplasma imitans] | 44/68 (64%) | 227 | 5.9e-23
|
| ref|WP_011113891.1| translation initiation factor IF-1 [Mycoplasma gallisepticum] | 43/68 (63%) | 223 | 3.0e-22
|
| ref|WP_027124200.1| translation initiation factor IF-1 [Mycoplasma pirum] | 40/67 (59%) | 214 | 6.7e-21
|
| ref|WP_084269090.1| translation initiation factor IF-1 [Mycoplasma alvi] | 39/67 (58%) | 214 | 7.3e-21
|
| ref|WP_031489021.1| translation initiation factor IF-1 [Ureaplasma canigenitalium] | 37/66 (56%) | 206 | 1.2e-19
|
| ref|WP_027120107.1| translation initiation factor IF-1 [Mycoplasma testudinis] | 40/68 (58%) | 204 | 1.9e-19
|
| ref|WP_038101504.1| translation initiation factor IF-1 [Ureaplasma diversum] | 37/69 (53%) | 203 | 3.9e-19
|
Maintained by Jun Ishikawa