General features
| Gene ID | MYPE1810
|
| Type | CDS
|
| From | 228442
|
| To | 227540
|
| Strand | -
|
| General name |
|
| Definition | conserved hypothetical protein
|
| nt length | 903
|
| aa length | 300
|
| m.w. | 35415.20
|
| COG | [S] Function unknown
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mpne | MPN241 conserved hypothetical protein 293265:294107 | 104 | 7.5e-28
|
| mgen | WP_010869332.1 DNA-binding protein WhiA [Mycoplasma genitalium] | 113 | 2.0e-31
|
| mpul | WP_041363985.1 DNA-binding protein WhiA [Mycoplasma pulmonis] | 94 | 2.2e-24
|
| mmob | WP_011264964.1 DNA-binding protein WhiA [Mycoplasma mobile] | 114 | 1.3e-31
|
| mmyc | NP_975902.1 hypothetical protein MSC_0935 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 132 | 3.7e-38
|
| mgal | WP_011113709.1 DNA-binding protein WhiA [Mycoplasma gallisepticum] | 90 | 1.2e-22
|
| uure | WP_004027130.1 DNA-binding protein WhiA [Ureaplasma urealyticum] | 154 | 2.5e-46
|
| phyt | WP_041624757.1 DNA-binding protein WhiA [Onion yellows phytoplasma] | 107 | 1.0e-28
|
| bsub | NP_391355.1 putative morphogen [Bacillus subtilis subsp. subtilis str. 168] | 127 | 9.6e-36
|
| cace | WP_010963835.1 MULTISPECIES: DNA-binding protein WhiA [Clostridium] | 125 | 1.0e-34
|
| ecoli | NP_415039.1 DNA-binding transcriptional repressor AllR [Escherichia coli str. K-12 substr. MG1655] | 27 | 9.2e-01
|
*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| LAGLIDADG_WhiA | 1 | WhiA LAGLIDADG-like domain | 118-208 | 88.3 | 2.6e-25
|
| HTH_WhiA | 1 | WhiA C-terminal HTH domain | 213-298 | 77.6 | 6.7e-22
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_011077008.1| DNA-binding protein WhiA [Mycoplasma penetrans] | 300/300 (100%) | 1538 | 0.0e+00
|
| ref|WP_004024887.1| DNA-binding protein WhiA [Mycoplasma iowae] | 135/300 (45%) | 618 | 1.6e-75
|
| ref|WP_066191817.1| DNA-binding protein WhiA, partial [Bacteroidales bacterium Barb6] | 95/246 (38%) | 459 | 2.7e-52
|
| ref|WP_004028307.1| DNA-binding protein WhiA [Spiroplasma melliferum] | 107/297 (36%) | 456 | 3.6e-51
|
| ref|WP_160624284.1| DNA-binding protein WhiA [Clostridiaceae bacterium DONG20-135] | 95/299 (31%) | 453 | 1.0e-50
|
| ref|WP_071891877.1| DNA-binding protein WhiA [Spiroplasma citri] | 105/297 (35%) | 448 | 7.3e-50
|
| ref|WP_070406387.1| MULTISPECIES: DNA-binding protein WhiA [unclassified Spiroplasma] | 102/297 (34%) | 447 | 7.7e-50
|
| ref|WP_053390415.1| DNA-binding protein WhiA [Spiroplasma kunkelii] | 105/297 (35%) | 444 | 2.7e-49
|
| ref|WP_126821315.1| DNA-binding protein WhiA [Spiroplasma endosymbiont of Megaselia nigra] | 105/297 (35%) | 443 | 3.1e-49
|
| ref|WP_105298641.1| DNA-binding protein WhiA [Spiroplasma sp. ChiS] | 104/297 (35%) | 442 | 4.6e-49
|
Maintained by Jun Ishikawa