General features
| Gene ID | MPN181
|
| Type | CDS
|
| From | 226051
|
| To | 226401
|
| Strand | +
|
| General name | rplR
|
| Definition | ribosomal protein L18
|
| nt length | 351
|
| aa length | 116
|
| m.w. | 13046.10
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10010 rplR ribosomal protein L18 1321698:1321339 | 97 | 7.0e-29
|
| mgen | WP_009885853.1 50S ribosomal protein L18 [Mycoplasma genitalium] | 178 | 1.7e-61
|
| mpul | WP_010925372.1 50S ribosomal protein L18 [Mycoplasma pulmonis] | 51 | 4.4e-11
|
| mmob | WP_011264771.1 50S ribosomal protein L18 [Mycoplasma mobile] | 66 | 3.2e-17
|
| mmyc | NP_975705.1 50S ribosomal protein L18 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 73 | 8.4e-20
|
| mgal | WP_011113296.1 50S ribosomal protein L18 [Mycoplasma gallisepticum] | 120 | 4.9e-38
|
| uure | WP_004025963.1 50S ribosomal protein L18 [Ureaplasma urealyticum] | 106 | 7.5e-33
|
| phyt | WP_011160591.1 MULTISPECIES: 50S ribosomal protein L18 [Candidatus Phytoplasma asteris] | 62 | 1.1e-15
|
| bsub | NP_388013.2 ribosomal protein L18 [Bacillus subtilis subsp. subtilis str. 168] | 69 | 1.2e-17
|
| cace | WP_010966396.1 MULTISPECIES: 50S ribosomal protein L18 [Clostridium] | 73 | 4.4e-19
|
| ecoli | NP_417763.1 50S ribosomal subunit protein L18 [Escherichia coli str. K-12 substr. MG1655] | 53 | 1.9e-11
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_L18p | 1 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | 2-116 | 139.5 | 5.9e-41
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874538.1| 50S ribosomal protein L18 [Mycoplasma pneumoniae] | 116/116 (100%) | 592 | 3.2e-77
|
| ref|WP_161611427.1| 50S ribosomal protein L18 [Mycoplasma pneumoniae] | 115/116 (99%) | 589 | 8.5e-77
|
| ref|WP_009885853.1| 50S ribosomal protein L18 [Mycoplasma genitalium] | 89/114 (78%) | 452 | 5.6e-56
|
| ref|WP_014894187.1| 50S ribosomal protein L18 [Mycoplasma genitalium] | 89/114 (78%) | 451 | 1.0e-55
|
| ref|WP_027122190.1| 50S ribosomal protein L18 [Mycoplasma imitans] | 67/113 (59%) | 357 | 2.4e-41
|
| ref|WP_027124205.1| 50S ribosomal protein L18 [Mycoplasma pirum] | 66/113 (58%) | 339 | 9.8e-39
|
| ref|WP_052664044.1| 50S ribosomal protein L18 [Mycoplasma alvi] | 69/113 (61%) | 305 | 1.5e-33
|
| ref|WP_011883711.1| 50S ribosomal protein L18 [Mycoplasma gallisepticum] | 69/114 (60%) | 300 | 8.7e-33
|
| ref|WP_011113296.1| 50S ribosomal protein L18 [Mycoplasma gallisepticum] | 69/114 (60%) | 300 | 1.1e-32
|
| ref|WP_014574383.1| 50S ribosomal protein L18 [Mycoplasma gallisepticum] | 68/114 (59%) | 292 | 1.6e-31
|
Maintained by Jun Ishikawa