General features
| Gene ID | MPN179
|
| Type | CDS
|
| From | 225061
|
| To | 225489
|
| Strand | +
|
| General name | rpsH
|
| Definition | ribosomal protein S8
|
| nt length | 429
|
| aa length | 142
|
| m.w. | 15876.91
|
| COG | [-] not in COGs
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10030 rpsH ribosomal protein S8 1322671:1322276 | 130 | 2.2e-41
|
| mgen | WP_010869359.1 30S ribosomal protein S8 [Mycoplasma genitalium] | 249 | 1.2e-88
|
| mpul | WP_010925374.1 30S ribosomal protein S8 [Mycoplasma pulmonis] | 113 | 6.8e-35
|
| mmob | WP_011264769.1 30S ribosomal protein S8 [Mycoplasma mobile] | 117 | 1.8e-36
|
| mmyc | NP_975707.3 30S ribosomal protein S8 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 122 | 5.4e-38
|
| mgal | WP_011113294.1 30S ribosomal protein S8 [Mycoplasma gallisepticum] | 182 | 3.0e-62
|
| uure | WP_004025683.1 MULTISPECIES: 30S ribosomal protein S8 [Ureaplasma] | 145 | 9.0e-48
|
| phyt | WP_011160589.1 MULTISPECIES: 30S ribosomal protein S8 [Candidatus Phytoplasma] | 128 | 4.3e-41
|
| bsub | NP_388011.2 ribosomal protein S8 (BS8) [Bacillus subtilis subsp. subtilis str. 168] | 127 | 1.0e-39
|
| cace | WP_010966398.1 MULTISPECIES: 30S ribosomal protein S8 [Clostridium] | 115 | 3.3e-35
|
| ecoli | NP_417765.1 30S ribosomal subunit protein S8 [Escherichia coli str. K-12 substr. MG1655] | 117 | 1.1e-35
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| Ribosomal_S8 | 1 | Ribosomal protein S8 | 13-142 | 150.6 | 2e-44
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874536.1| 30S ribosomal protein S8 [Mycoplasma pneumoniae] | 142/142 (100%) | 724 | 1.4e-96
|
| ref|WP_058158311.1| 30S ribosomal protein S8 [Mycoplasma pneumoniae] | 141/141 (100%) | 715 | 3.5e-95
|
| ref|WP_014893969.1| 30S ribosomal protein S8 [Mycoplasma genitalium] | 123/137 (89%) | 641 | 5.9e-84
|
| ref|WP_010869359.1| 30S ribosomal protein S8 [Mycoplasma genitalium] | 122/134 (91%) | 636 | 4.1e-83
|
| ref|WP_027120100.1| 30S ribosomal protein S8 [Mycoplasma testudinis] | 95/132 (71%) | 498 | 2.9e-62
|
| ref|WP_027124207.1| 30S ribosomal protein S8 [Mycoplasma pirum] | 91/133 (68%) | 485 | 3.4e-60
|
| ref|WP_033160188.1| 30S ribosomal protein S8 [Mycoplasma alvi] | 88/133 (66%) | 477 | 5.8e-59
|
| ref|WP_011113294.1| 30S ribosomal protein S8 [Mycoplasma gallisepticum] | 85/132 (64%) | 463 | 6.4e-57
|
| ref|WP_014885810.1| 30S ribosomal protein S8 [Mycoplasma gallisepticum] | 85/132 (64%) | 462 | 9.6e-57
|
| ref|WP_027122188.1| 30S ribosomal protein S8 [Mycoplasma imitans] | 84/132 (63%) | 459 | 3.1e-56
|
Maintained by Jun Ishikawa