General features
| Gene ID | MPN176
|
| Type | CDS
|
| From | 224000
|
| To | 224335
|
| Strand | +
|
| General name | rplX
|
| Definition | ribosomal protein L24
|
| nt length | 336
|
| aa length | 111
|
| m.w. | 12432.78
|
| COG | [J] Translation, ribosomal structure and biogenesis
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| mype | MYPE10060 rplX ribosomal protein L24 1323770:1323447 | 84 | 3.2e-24
|
| mgen | WP_009885846.1 50S ribosomal protein L24 [Mycoplasma genitalium] | 144 | 6.0e-48
|
| mpul | WP_010925377.1 50S ribosomal protein L24 [Mycoplasma pulmonis] | 58 | 5.2e-14
|
| mmob | WP_011264766.1 50S ribosomal protein L24 [Mycoplasma mobile] | 38 | 3.3e-06
|
| mmyc | NP_975710.1 50S ribosomal protein L24 [Mycoplasma mycoides subsp. mycoides SC str. PG1] | 33 | 2.6e-04
|
| mgal | WP_011113291.1 50S ribosomal protein L24 [Mycoplasma gallisepticum] | 108 | 7.3e-34
|
| uure | WP_004025812.1 50S ribosomal protein L24 [Ureaplasma urealyticum] | 101 | 4.6e-31
|
| bsub | NP_388008.1 ribosomal protein L24 (BL23) [Bacillus subtilis subsp. subtilis str. 168] | 65 | 3.3e-16
|
| cace | WP_010966401.1 MULTISPECIES: 50S ribosomal protein L24 [Clostridium] | 51 | 7.4e-11
|
| ecoli | NP_417768.1 50S ribosomal subunit protein L24 [Escherichia coli str. K-12 substr. MG1655] | 48 | 1.7e-09
|
*mype, Mycoplasma penetrans; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;
Pfam search result:
| Model | No. | Descrip
tion | Position (aa) | Score | E-value
|
| ribosomal_L24 | 1 | Ribosomal proteins 50S L24/mitochondrial 39S L24 | 39-109 | 47.8 | 1.4e-12
|
| KOW | 1 | KOW motif | 6-36 | 23.3 | 4.3e-05
|
BLAST search result (top 10 hits)
| ID Description | Identity | Score | E-value
|
| ref|WP_010874533.1| 50S ribosomal protein L24 [Mycoplasma pneumoniae] | 111/111 (100%) | 555 | 7.7e-72
|
| ref|WP_009885846.1| 50S ribosomal protein L24 [Mycoplasma genitalium] | 77/111 (69%) | 362 | 2.0e-42
|
| ref|WP_014894185.1| 50S ribosomal protein L24 [Mycoplasma genitalium] | 76/111 (68%) | 354 | 3.4e-41
|
| ref|WP_027124210.1| 50S ribosomal protein L24 [Mycoplasma pirum] | 63/111 (56%) | 286 | 8.2e-31
|
| ref|WP_033160185.1| 50S ribosomal protein L24 [Mycoplasma alvi] | 62/111 (55%) | 278 | 1.3e-29
|
| ref|WP_027120097.1| 50S ribosomal protein L24 [Mycoplasma testudinis] | 62/111 (55%) | 278 | 1.3e-29
|
| ref|WP_011113291.1| 50S ribosomal protein L24 [Mycoplasma gallisepticum] | 60/111 (54%) | 271 | 1.6e-28
|
| ref|WP_027122186.1| 50S ribosomal protein L24 [Mycoplasma imitans] | 57/111 (51%) | 261 | 5.8e-27
|
| ref|WP_004025812.1| 50S ribosomal protein L24 [Ureaplasma urealyticum] | 58/111 (52%) | 252 | 1.1e-25
|
| ref|WP_006688875.1| 50S ribosomal protein L24 [Ureaplasma parvum] | 58/111 (52%) | 252 | 1.3e-25
|
Maintained by Jun Ishikawa